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@Oddant1 Oddant1 commented Aug 22, 2024

Re nest the pipelines so things will parallelize

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Oddant1 commented Aug 22, 2024

blocked by qiime2/qiime2#790

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colinbrislawn commented Sep 10, 2024

Looks like this plugin is slower when adding --parallel!
Something was up with --parallel when I ran it

Is this PR related or should I open a new issue?

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Oddant1 commented Sep 12, 2024

@colinbrislawn this PR is related

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Oddant1 commented Oct 22, 2024

@ebolyen and @gregcaporaso now that qiime2/qiime2#790 is merged this ought to work as intended

@gregcaporaso gregcaporaso self-assigned this Oct 25, 2024
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gregcaporaso commented Nov 4, 2024

@Oddant1, fyi I rebased to test with the most recent environment files - that's what the force-pushes are, in case you're wondering.

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All changes look right, thanks @Oddant1! Just doing some local testing of serial v parallel runs - if all good there, this is ready for merge.

@gregcaporaso gregcaporaso merged commit 21f97b8 into qiime2:main Nov 7, 2024
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3 participants