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Can't install via conda for Python 3.11 #1202
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Bioconda does not yet make Python 3.11 builds, which is a bioconda issue that has nothing to do with pysam. See bioconda/bioconda-recipes#37805. If you want to use pysam with Python 3.11, you should install via (Duplicate of #1191.) |
Thank you so much, @jmarshall - I used pip instead, and it worked! You just saved me a lot of trouble! |
As of this month, bioconda now provides pysam for Python 3.11 and 3.12. See bioconda/bioconda-recipes#33333 (comment). |
I am trying to install pysam on a Ubuntu virtual machine. I have Python 3.11 (latest) and am attempting to install pysam in a miniconda environment, specifically running the command:
conda install pysam -c bioconda -n sgRNA
To install pysam via bioconda. When I do this, the initial and flexible solver fails, with the following error message:
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