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.. An online version of the release history can be found here:
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.. http://pysam.readthedocs.io/en/latest/release.html
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- Release 0.23.2
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+ Release 0.23.3
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==============
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- .. rubric:: 6 June 2025
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+ .. rubric:: 10 June 2025
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This is a bugfix release, still wrapping htslib/samtools/bcftools 1.21.
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@@ -16,6 +16,23 @@ The final pysam release that supported Python 3.6 and 3.7 was v0.23.0.
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Bugs fixed:
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+ * Worked around Cython 3.1.2 bug whereby a new Cython-internal function
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+ incorrectly triggered the pysam build system's duplicate symbol check.
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+
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+
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+ Release 0.23.2
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+ ==============
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+ .. rubric:: 6 June 2025
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+ This is a bugfix release, still wrapping htslib/samtools/bcftools 1.21.
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+ It has been tested with Python versions 3.8 through 3.13, and wheels are
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+ available via PyPI_ for all of those Python versions. Wheels are built for
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+ macOS and Linux (manylinux_2_28 and musllinux_1_2) on both ARM and x86-64.
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+ Bugs fixed:
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+
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* Pysam 0.23.1 inadvertently broke binary compatibility for Cython projects
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by changing the size of :class:`.AlignedSegment`. That class has been
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restored to its previous size, so v0.23.2 restores binary compatibility
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# pysam versioning information
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- __version__ = "0.23.2 "
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+ __version__ = "0.23.3 "
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__samtools_version__ = "1.21"
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__bcftools_version__ = "1.21"
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