update min supported Python and testing workflow

.github/workflows/tests.yaml

@@ -18,15 +18,17 @@ jobs:
       matrix:
         os: [ubuntu-latest]
         environment-file:
-          - ci/envs/38-minimal.yaml
-          - ci/envs/39-latest.yaml
+          - ci/envs/310-minimal.yaml
           - ci/envs/310-latest.yaml
           - ci/envs/311-latest.yaml
-          - ci/envs/311-dev.yaml
+          - ci/envs/312-latest.yaml
+          - ci/envs/312-dev.yaml
         include:
-          - environment-file: ci/envs/311-latest.yaml
-            os: macos-latest
-          - environment-file: ci/envs/311-latest.yaml
+          - environment-file: ci/envs/312-latest.yaml
+            os: macos-13 # Intel
+          - environment-file: ci/envs/312-latest.yaml
+            os: macos-14 # Apple Silicon
+          - environment-file: ci/envs/312-latest.yaml
             os: windows-latest
     defaults:
       run:
@@ -46,16 +48,6 @@ jobs:
 
       - name: Test pointpats
         run: |
-          pytest -v --color yes --cov pointpats --cov-config .coveragerc --cov-append --cov-report term-missing --cov-report xml .
+          pytest -v --color yes --cov pointpats --cov-append --cov-report term-missing --cov-report xml .
 
-      - uses: codecov/codecov-action@v3
-
-      - name: Generate and publish the report
-        if: |
-          failure()
-          && steps.status.outcome == 'failure'
-          && github.event_name == 'schedule'
-          && github.repository_owner == 'pysal'
-        uses: xarray-contrib/issue-from-pytest-log@v1
-        with:
-          log-path: pytest-log.jsonl
+      - uses: codecov/codecov-action@v4

ci/envs/38-minimal.yaml → ci/envs/310-minimal.yaml

@@ -2,14 +2,14 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.8
+  - python=3.10
   - scipy=1.8
   - numpy=1.21
   - pandas=1.3
   - matplotlib=3.4
   - libpysal=4.5
   # tests
-  - scikit-learn==1.2
+  - scikit-learn=1.2
   - shapely
   - geopandas
   - pytest

ci/envs/311-latest.yaml

@@ -19,9 +19,3 @@ dependencies:
   - pip
   - pip:
       - KDEpy
-  # for docs build action (this env only)
-  - nbsphinx
-  - numpydoc
-  - sphinx
-  - sphinxcontrib-bibtex
-  - sphinx_bootstrap_theme

ci/envs/311-dev.yaml → ci/envs/312-dev.yaml

@@ -2,7 +2,7 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.11
+  - python=3.12
   - numpy
   - pandas
   - matplotlib

ci/envs/39-latest.yaml → ci/envs/312-latest.yaml

@@ -2,7 +2,7 @@ name: test
 channels:
   - conda-forge
 dependencies:
-  - python=3.9
+  - python=3.12
   - scipy
   - numpy
   - pandas
@@ -19,3 +19,9 @@ dependencies:
   - pip
   - pip:
       - KDEpy
+  # for docs build action (this env only)
+  - nbsphinx
+  - numpydoc
+  - sphinx
+  - sphinxcontrib-bibtex
+  - sphinx_bootstrap_theme

pyproject.toml

@@ -25,7 +25,7 @@ classifiers = [
     "Intended Audience :: Science/Research",
     "Topic :: Scientific/Engineering :: GIS",
 ]
-requires-python = ">=3.7"
+requires-python = ">=3.10"
 dependencies = [
     "numpy",
     "pandas",
@@ -71,7 +71,6 @@ line-length = 88
 [tool.ruff]
 line-length = 88
 select = ["E", "F", "W", "I", "UP", "N", "B", "A", "C4", "SIM", "ARG"]
-target-version = "py39"
 ignore = [
     "B006",
     "B008",