V0.11.0

What's Changed

• Runtime import by @BalzaniEdoardo in #561
• Neo io by @BalzaniEdoardo in #503
• Refactoring the perievent module with better documentation and unified interface by @wulfdewolf in #559
• Fix null distribution tutorial by @wulfdewolf in #576
• Fix electrode metadata ordering when units table has a DynamicTableRegion column by @h-mayorquin in #570
• 572 empty interval warp by @wulfdewolf in #577
• Bumping 0.11 by @gviejo in #578

New Contributors

• @h-mayorquin made their first contribution in #570

Full Changelog: v0.10.3...v0.11.0

V0.10.3

What's Changed

• Skip Checks for Links to Sklearn Docs (htmlproofer) and Add Markdown Link Checking to CI by @BalzaniEdoardo in #531
• Adding subsample function for tsgroup by @gviejo in #532
• Fix smooth kernel by @lilytong0919 in #541
• Fixing tuple/list of cross-corr by @gviejo in #543
• Doc convolve by @gviejo in #544
• Small compute_tuning_curve fixes by @wulfdewolf in #546
• 537 fix timestamps shift by @wulfdewolf in #540
• Fix issue #548 by @gviejo in #552
• Fix 549 by @gviejo in #555
• fix repr by @gviejo in #556
• Bumping 0.10.3 by @gviejo in #557

New Contributors

• @lilytong0919 made their first contribution in #541

Full Changelog: v0.10.2...v0.10.3

V0.10.2

What's Changed

• fixed incorrect "data" field reference during Tsg loading by @danielsvedberg in #521
• Correct mutual information mean firing rates by @wulfdewolf in #522
• Update workshop details in README.md by @gviejo in #527
• A tutorial to introduce the randomisation module by @wulfdewolf in #523
• Dev by @gviejo in #529
• Update Python version to 3.12 in deploy workflow by @gviejo in #530

New Contributors

• @danielsvedberg made their first contribution in #521

Full Changelog: v0.10.1...v0.10.2

V0.10.1

What's Changed

• Generalize tuning curves computation to n-dimensions by @gviejo in #512
• Fixing einsum by @gviejo in #514
• Fix smoothing in decoding by @wulfdewolf in #513
• Change smoothing to sliding window and remove gaussian smoothing by @sjvenditto in #519
• Bumping 0.10.1 by @gviejo in #515

Full Changelog: v0.10.0...v0.10.1

V0.10.0

What's Changed

• Adds specification and warning for numba/python interaction by @billbrod in #473
• 466 base docstrings by @wulfdewolf in #474
• 477 n-dimensional tuning curves by @wulfdewolf in #478
• 475 decode generalisation by @wulfdewolf in #480
• Decoding bug fix by @wulfdewolf in #484
• 476 template matching by @wulfdewolf in #482
• Add restrict_info method for metadata by @sjvenditto in #483
• Add detect_oscillatory_events method by @jacobsimon in #485
• Fixing perievent by @gviejo in #492
• Fix TsdFrame repr for boolean data type by @sjvenditto in #493
• Fix indexing of a TsdFrame with a Tsd/TsdFrame by @sjvenditto in #494
• use shape for latest zarr by @wulfdewolf in #499
• 489 refactor mutual information by @wulfdewolf in #495
• Add in_interval method for time series objects by @sjvenditto in #500
• add intersphinx setup by @wulfdewolf in #502
• 490 refactor discrete tuning curves by @wulfdewolf in #501
• version fix for foc by @gviejo in #508
• return_counts argument by @wulfdewolf in #506
• Fix 504 issue by @gviejo in #507
• Adding smoothing to decoding by @wulfdewolf in #509
• Bumping 0.10.0 by @gviejo in #511

Full Changelog: v0.9.2...v0.10.0

v0.9.2

What's Changed

• Update docs and add contributor guide by @jacobsimon in #462
• 370 isi by @wulfdewolf in #463
• Fix iset repr by @gviejo in #468
• fixes npz loading of objects with metadata saved before v0.9 by @sjvenditto in #469
• Bump 0.9.2 by @gviejo in #471
• Bump 0.9.2 by @gviejo in #472

Full Changelog: v0.9.1...v0.9.2

V0.9.1

What's Changed

• Fix tsdframe repr by @gviejo in #464
• Dev by @gviejo in #465

Full Changelog: v0.9.0...v0.9.1

V0.9.0

• New private class: _MetadataMixin and _Metadata(UserDict) (core/metadata_class.py). Can be inherited by:
  • IntervalSet
  • TsdFrame
  • TsGroup
    This class assumes that whatever is inheriting it has the private property self._initialized.
    metadata: public read-only view of metadata
• Add a decimate method to _BaseTsd.
• Adds support for a new derivative method which wraps np.gradient with support for epochs and time index

What's Changed

• make GHA checkout grab git tags by @billbrod in #441
• Fix pynajax compat by @BalzaniEdoardo in #434
• Publish workflow by @billbrod in #425
• Preserve metadata when calling count on a TsGroup by @sjvenditto in #445
• Adding new logos by @gviejo in #446
• drop rate metadata when using count by @sjvenditto in #447
• Add new dimension to Tsd's after loading in the case of lazy loading by @wulfdewolf in #450
• Decimate by @BalzaniEdoardo in #452
• Overhaul of metadata to move away from pandas by @sjvenditto in #415
• Add gradient method for calculating derivatives by @jacobsimon in #451
• Small fixes before release by @gviejo in #458
• 0.9.0 by @gviejo in #459
• 0.9.0 by @gviejo in #460
• Update deploy.yml by @gviejo in #461

New Contributors

• @wulfdewolf made their first contribution in #450
• @jacobsimon made their first contribution in #451

Full Changelog: v0.8.5...v0.9.0

V0.8.5

• Implements nap.build_tensor and nap.warp_tensor for trial-based data.
• Fix horizontal slicing for TsdFrame (Issue )
• Fix empty TsGroup. The rate attribute was not added to the metadata dataframe.
• New example notebook : Trial-aligned choice decoding in International Brain Lab data
• Set pynapple version dynamically by reading the github tag.

What's Changed

• Fixing doc by @gviejo in #414
• Update README.md by @gviejo in #416
• don't always raise deprecation warning by @billbrod in #417
• Issue 367 value from by @BalzaniEdoardo in #421
• Update README.md by @gviejo in #423
• chage example to spk/sec by @BalzaniEdoardo in #424
• Set version dynamically by @billbrod in #418
• Add groupby and groupby_apply functionality to metadata by @sjvenditto in #383
• Fix metadata join when doing intervals intersection by @gviejo in #426
• Fix tsgrouprate by @gviejo in #427
• Implementing build_tensor and warp_tensor in warping.py by @gviejo in #388
• Updating doc by @gviejo in #429
• nwb interface: allow full paths in getitem (2) by @magland in #364
• fix tsdframe repr when empty by @gviejo in #433
• [doc] examples: IBL choice decoding by @cwindolf in #432
• Fix perievent doc by @gviejo in #436
• Fix 437 issue by @gviejo in #438
• Bump 0.8.5 by @gviejo in #439
• Bump 0.8.5 by @gviejo in #440

New Contributors

• @billbrod made their first contribution in #417
• @cwindolf made their first contribution in #432

Full Changelog: v0.8.4...v0.8.5

V0.8.4

• Fix value printing of IntervalSet when rows are collapsed
• Backward compatibility fix for loading npz files with TsGroup
• Fix indexing of IntervalSet to be able to use -1
• Add column names for compute_wavelet_transform

What's Changed

• add column names for compute_wavelet_transform by @sjvenditto in #405
• Backward compatibility fix for loading npz files with TsGroup by @gviejo in #410
• Fix value printing of IntervalSet when rows are collapsed by @sjvenditto in #411
• fix indexing of IntervalSet to be able to use -1 by @sjvenditto in #409
• Bumping 0.8.4 by @gviejo in #412
• Update setup.py by @gviejo in #413

Full Changelog: v0.8.3...v0.8.4