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@pnlbwh

Psychiatry Neuroimaging Lab @ BWH/HMS

Psychiatry Neuroimaging Lab at Brigham and Women's Hospital and Harvard Medical School

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  1. dMRIharmonization dMRIharmonization Public

    Multi-site dMRI harmonization

    Python 47 14

  2. pnlNipype pnlNipype Public

    PNL pipeline for NIFTI images

    Python 10 15

  3. TBSS TBSS Public

    Tract based spatial statistics using ANTs and FSL

    Python 12 7

  4. SlicerDiffusionQC SlicerDiffusionQC Public

    Quality checking of DWMRI

    Python 6 5

  5. luigi-pnlpipe luigi-pnlpipe Public

    NIFTI pipeline glued together using Luigi

    Python 7 6

  6. ukftractography ukftractography Public

    C 26 27

Repositories

Showing 10 of 52 repositories
  • CNN-Diffusion-MRIBrain-Segmentation Public

    CNN based brain masking

    pnlbwh/CNN-Diffusion-MRIBrain-Segmentation’s past year of commit activity
    Python 15 11 2 0 Updated Mar 10, 2025
  • TBSS Public

    Tract based spatial statistics using ANTs and FSL

    pnlbwh/TBSS’s past year of commit activity
    Python 12 7 9 1 Updated Mar 10, 2025
  • diskusage-logging Public

    Log disk usage automatically

    pnlbwh/diskusage-logging’s past year of commit activity
    Python 2 1 2 0 Updated Mar 4, 2025
  • ukftractography Public
    pnlbwh/ukftractography’s past year of commit activity
    C 26 27 15 3 Updated Feb 13, 2025
  • luigi-pnlpipe Public

    NIFTI pipeline glued together using Luigi

    pnlbwh/luigi-pnlpipe’s past year of commit activity
    Python 7 6 13 1 Updated Jan 16, 2025
  • pnlNipype Public

    PNL pipeline for NIFTI images

    pnlbwh/pnlNipype’s past year of commit activity
    Python 10 15 19 0 Updated Jan 14, 2025
  • tract_querier Public Forked from demianw/tract_querier

    Implementation of the White Matter Query Language and associated tools for dMRI white matter tract extraction and analysis

    pnlbwh/tract_querier’s past year of commit activity
    Python 0 27 0 0 Updated Jan 10, 2025
  • dMRIharmonization Public

    Multi-site dMRI harmonization

    pnlbwh/dMRIharmonization’s past year of commit activity
    Python 47 14 12 0 Updated Jan 9, 2025
  • HD-BET Public Forked from MIC-DKFZ/HD-BET

    MRI brain extraction tool

    pnlbwh/HD-BET’s past year of commit activity
    Python 0 Apache-2.0 70 0 0 Updated Jan 6, 2025
  • multi-shell-dMRIharmonization Public

    Harmonization of multi-shell diffusion MRI, an enhancement of https://github.com/pnlbwh/dMRIharmonization

    pnlbwh/multi-shell-dMRIharmonization’s past year of commit activity
    Python 9 5 5 0 Updated Nov 19, 2024
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