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pijushrkmvm-spec/README.md

About Me

class PijushChakraborty:

    def __init__(self):
        self.role = "M.Sc. Bioinformatics Student"

        self.interests = [
            "Genomics",
            "Computational Biology",
            "NGS Data Analysis",
            "Bioinformatics Pipelines"
        ]

        self.currently_learning = [
            "Bowtie2",
            "Velvet",
            "Shell Scripting",
            "Algorithms in Python"
        ]

        self.goal = "To bridge biology with computational problem-solving"

Technical Stack

Programming & Development



Bioinformatics & Scientific Tools


Knowledge Domains

Domain Expertise
Sequence Analysis BLAST, MUSCLE, CLUSTALW, T-Coffee, BioPython
NGS Data Processing FastQC, Cutadapt
Currently Exploring Bowtie2, Velvet
Structural Biology Discovery Studio, SWISS-PDB Viewer
Biological Databases PubMed, GenBank, EMBL, UniProtKB

Featured Projects

Project Description
Pairwise Aligner Learning-focused BioPython project demonstrating pairwise alignment concepts through Jupyter Notebook and Flask mini-app.
GERMIVERSE Bioinformatics web platform in development for genomic analysis and workflow implementation.

Learning Roadmap




Current Mission

while knowledge < mastery:
    learn()
    practice()
    build_projects()
    improve()

Continually focused on stepwise learning, from foundational algorithmic logic to industry-standard genomic pipelines.


Popular repositories Loading

  1. FASTA-Analyzer FASTA-Analyzer Public

    Python script to analyze FASTA files

    Python 1

  2. germiverse-tools germiverse-tools Public

    Bioinformatics tools

    Python 1

  3. genescope genescope Public

    A Python-based bioinformatics toolkit for FASTA parsing and sequence analysis.

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  4. pijushrkmvm-spec pijushrkmvm-spec Public

    Bioinformatics learner

  5. bioinformatics-git-learning bioinformatics-git-learning Public

    Learning Git and GitHub through bioinformatics examples

    Python

  6. AlignIO-demonstration AlignIO-demonstration Public

    A hands-on demonstration of parsing and analyzing multiple sequence alignment files using AlignIO.

    Jupyter Notebook