api_trusted_hosts_only_whitelist_path_regexp setting #870
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name: Build and Test | |
on: | |
push: | |
branches: | |
- master | |
pull_request: | |
types: [opened, synchronize, reopened] | |
branches-ignore: | |
- 'l10n_master' | |
workflow_dispatch: | |
jobs: | |
build: | |
name: Build and Test | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 # Shallow clones should be disabled for a better relevancy of analysis | |
- name: Set up JDK 11 | |
run: | | |
sudo apt-get update | |
sudo apt-get -q -y install default-jdk | |
# apt-get -q -y install libservlet3.1-java tomcat9 | |
# uses: actions/setup-java@v1 | |
# with: | |
# java-version: 11 | |
- name: Set up Maven | |
uses: stCarolas/[email protected] | |
with: | |
maven-version: 3.8.7 | |
- name: Cache Maven packages | |
uses: actions/cache@v3 | |
with: | |
path: ~/.m2 | |
key: ${{ runner.os }}-m2-${{ hashFiles('**/pom.xml') }} | |
restore-keys: ${{ runner.os }}-m2 | |
- name: Build | |
run: | | |
VERSION=$(grep -oP '<application.version>\K[^<]+' /home/runner/work/ctsms/ctsms/pom.xml) | |
echo "VERSION=$VERSION" >> $GITHUB_ENV | |
COMMIT=$(git log --format=%B -n 1 "$GITHUB_SHA") | |
COMMIT_MESSAGE_REGEX="[Mm]erge [a-zA-Z0-9]+ into [a-zA-Z0-9]+" | |
if [[ $COMMIT =~ $COMMIT_MESSAGE_REGEX ]]; | |
then | |
COMMIT=$(echo "$COMMIT" | sed -e 's/[Mm]erge \([a-zA-Z0-9]\+\) into [a-zA-Z0-9]\+/\1/' | cut -c 1-7) | |
else | |
COMMIT=$(git rev-parse --short HEAD) | |
fi | |
echo "COMMIT=$COMMIT" >> $GITHUB_ENV | |
sed -r -i "s/<application.version>([^<]+)<\/application.version>/<application.version>\1 [$COMMIT]<\/application.version>/" /home/runner/work/ctsms/ctsms/pom.xml | |
UUID="test-" | |
UUID+=$(cat /proc/sys/kernel/random/uuid) | |
sed -r -i "s/<application.uuid><\/application.uuid>/<application.uuid>$UUID<\/application.uuid>/" /home/runner/work/ctsms/ctsms/pom.xml | |
mvn install -DskipTests --no-transfer-progress | |
- name: Setup database | |
run: | | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_database.sh | |
/home/runner/work/ctsms/ctsms/.github/workflows/setup_database.sh | |
- name: Download master data | |
run: | | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/download_masterdata.sh | |
sudo /home/runner/work/ctsms/ctsms/.github/workflows/download_masterdata.sh | |
echo "CTSMS_PROPERTIES=/ctsms/properties" >> $GITHUB_ENV | |
echo "CTSMS_JAVA=/ctsms/java" >> $GITHUB_ENV | |
- name: Setup BulkProcessor | |
run: | | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_bulkprocessor.sh | |
sudo -E /home/runner/work/ctsms/ctsms/.github/workflows/setup_bulkprocessor.sh | |
- name: Setup dbtool.sh | |
env: | |
MAIL_SENDER_HOST: ${{ secrets.MAIL_SENDER_HOST }} | |
MAIL_SENDER_PORT: ${{ secrets.MAIL_SENDER_PORT }} | |
MAIL_SENDER_PROTOCOL: ${{ secrets.MAIL_SENDER_PROTOCOL }} | |
MAIL_SENDER_USERNAME: ${{ secrets.MAIL_SENDER_USERNAME }} | |
MAIL_SENDER_PASSWORD: ${{ secrets.MAIL_SENDER_PASSWORD }} | |
MAIL_SENDER_AUTH: ${{ secrets.MAIL_SENDER_AUTH }} | |
MAIL_SENDER_STARTTLS: ${{ secrets.MAIL_SENDER_STARTTLS }} | |
MAIL_SENDER_ADDRESS: ${{ secrets.MAIL_SENDER_ADDRESS }} | |
run: | | |
sudo echo "email_exec_from_address=$MAIL_SENDER_ADDRESS" >> /ctsms/properties/ctsms-settings.properties | |
sudo echo "email_exec_from_name=Phoenix CTMS Automated Tests" >> /ctsms/properties/ctsms-settings.properties | |
sudo echo "job_mail_sender_host=$MAIL_SENDER_HOST" >> /ctsms/properties/ctsms-applicationcontext.properties | |
sudo echo "job_mail_sender_port=$MAIL_SENDER_PORT" >> /ctsms/properties/ctsms-applicationcontext.properties | |
sudo echo "job_mail_sender_protocol=$MAIL_SENDER_PROTOCOL" >> /ctsms/properties/ctsms-applicationcontext.properties | |
sudo echo "job_mail_sender_username=$MAIL_SENDER_USERNAME" >> /ctsms/properties/ctsms-applicationcontext.properties | |
sudo echo "job_mail_sender_password=$MAIL_SENDER_PASSWORD" >> /ctsms/properties/ctsms-applicationcontext.properties | |
sudo touch /ctsms/properties/ctsms-job-mail-sender.properties | |
sudo chown ctsms:ctsms /ctsms/properties/ctsms-job-mail-sender.properties | |
sudo chmod 777 /ctsms/properties/ctsms-job-mail-sender.properties | |
sudo echo "mail.smtp.auth=$MAIL_SENDER_AUTH" >> /ctsms/properties/ctsms-job-mail-sender.properties | |
sudo echo "mail.smtp.starttls.enable=$MAIL_SENDER_STARTTLS" >> /ctsms/properties/ctsms-job-mail-sender.properties | |
sudo chown ctsms:ctsms /home/runner/work/ctsms/ctsms/.github/workflows/dbtool.sh | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/dbtool.sh | |
sudo mv /home/runner/work/ctsms/ctsms/.github/workflows/dbtool.sh /ctsms/dbtool.sh | |
sudo chmod 777 /home | |
sudo chmod 777 /home/runner | |
sudo chmod 777 /home/runner/work | |
sudo chmod 777 /home/runner/work/ctsms | |
sudo chmod 777 /home/runner/work/ctsms/ctsms/web -R | |
- name: Initialize DB | |
run: | | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/init_database.sh | |
/home/runner/work/ctsms/ctsms/.github/workflows/init_database.sh | |
- name: Setup Tomcat | |
run: | | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_tomcat.sh | |
sudo -E /home/runner/work/ctsms/ctsms/.github/workflows/setup_tomcat.sh | |
- name: Setup ChromeDriver | |
run: | | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/setup_selenium.sh | |
sudo /home/runner/work/ctsms/ctsms/.github/workflows/setup_selenium.sh | |
sudo chmod 755 /home/runner/work/ctsms/ctsms/.github/workflows/run_selenium_test.sh | |
sudo apt-get -q -y install wkhtmltopdf | |
# xvfb-run java -Dwebdriver.chrome.driver=/usr/bin/chromedriver -jar selenium-server-standalone-4.4.0.jar 2>&1 & | |
# sleep 5 | |
- name: Load demo data | |
run: | | |
/ctsms/dbtool.sh -ldd -f | |
- name: Run tests | |
env: | |
FTP_HOST: ${{ secrets.FTP_HOST }} | |
FTP_USERNAME: ${{ secrets.FTP_USERNAME }} | |
FTP_PASSWORD: ${{ secrets.FTP_PASSWORD }} | |
FTP_PATH: ${{ secrets.FTP_PATH }} | |
run: | | |
/home/runner/work/ctsms/ctsms/.github/workflows/run_selenium_test.sh org.phoenixctms.ctsms.selenium.proband.* "Proband Tests" [email protected] | |
/home/runner/work/ctsms/ctsms/.github/workflows/run_selenium_test.sh org.phoenixctms.ctsms.selenium.trial.* "Trial Tests" [email protected] | |
# - name: test perl selenium remote | |
# run: | | |
# perl /home/runner/work/ctsms/ctsms/.github/workflows/seleniumtest.pl |