Update checksum schema for compat with primaschema 3136a28d1c9

bede · bede · commit 11dc65d4dce7 · 2026-03-12T08:37:13.000Z
diff --git a/schemes/artic/400/v1.0.0/info.json b/schemes/artic/400/v1.0.0/info.json
@@ -21,8 +21,8 @@
     "citations": [
         "https://doi.org/10.1101%2F2020.09.04.283077"
     ],
-    "primer_checksum": "primaschema:bed:3aa63ea0f7621a9b",
-    "primer_file_sha256": "sha256:6f3e3899745e87087184550effda4d958d258c31d12d2832f6050c9dbb13271a",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "6f3e3899745e87087184550effda4d958d258c31d12d2832f6050c9dbb13271a",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v2.0.0/info.json b/schemes/artic/400/v2.0.0/info.json
@@ -22,8 +22,8 @@
     "citations": [
         "https://doi.org/10.1101%2F2020.09.04.283077"
     ],
-    "primer_checksum": "primaschema:bed:76a07be91780d545",
-    "primer_file_sha256": "sha256:ebbdfb9b21607c24e4bcad65a8fe86f9dee7b5c4f4e308f3d5e45eed925b7f32",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "ebbdfb9b21607c24e4bcad65a8fe86f9dee7b5c4f4e308f3d5e45eed925b7f32",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v3.0.0/info.json b/schemes/artic/400/v3.0.0/info.json
@@ -32,8 +32,8 @@
             "home_page": "https://eurofinsgenomics.com"
         }
     ],
-    "primer_checksum": "primaschema:bed:080b85a49a2bc853",
-    "primer_file_sha256": "sha256:99072afd2bdadda154f88b1fd2284525175648371fa1098c82ef67ff9b928f13",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "99072afd2bdadda154f88b1fd2284525175648371fa1098c82ef67ff9b928f13",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v4.0.0/info.json b/schemes/artic/400/v4.0.0/info.json
@@ -32,8 +32,8 @@
             "home_page": "https://eurofinsgenomics.com"
         }
     ],
-    "primer_checksum": "primaschema:bed:57041b9b17592d85",
-    "primer_file_sha256": "sha256:947142cfa7909fba37b55db3ce9a82aad298db26ea448fae0b8d7c6233b52ed8",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "947142cfa7909fba37b55db3ce9a82aad298db26ea448fae0b8d7c6233b52ed8",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v4.1.0/info.json b/schemes/artic/400/v4.1.0/info.json
@@ -32,8 +32,8 @@
             "home_page": "https://eurofinsgenomics.com"
         }
     ],
-    "primer_checksum": "primaschema:bed:b7d72771fcfa8a34",
-    "primer_file_sha256": "sha256:4c9d546713405d74a558ef50094e2bc3aaadc60644b3a16ce14a178d5d20284a",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "4c9d546713405d74a558ef50094e2bc3aaadc60644b3a16ce14a178d5d20284a",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v5.0.0/info.json b/schemes/artic/400/v5.0.0/info.json
@@ -22,8 +22,8 @@
     "citations": [
         "https://doi.org/10.1101%2F2020.09.04.283077"
     ],
-    "primer_checksum": "primaschema:bed:b2e359aafd5747a0",
-    "primer_file_sha256": "sha256:f3154104f2ac9d94bc33d59067e1b00e0765a11c19dee9546b6596ae18b805f3",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "f3154104f2ac9d94bc33d59067e1b00e0765a11c19dee9546b6596ae18b805f3",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v5.2.0/info.json b/schemes/artic/400/v5.2.0/info.json
@@ -22,8 +22,8 @@
     "citations": [
         "https://doi.org/10.1101%2F2020.09.04.283077"
     ],
-    "primer_checksum": "primaschema:bed:4afc78ddab65b5a8",
-    "primer_file_sha256": "sha256:5ff635af76ea117b112571cc456c544f96a3dbea782c773184da12505f11c75d",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "5ff635af76ea117b112571cc456c544f96a3dbea782c773184da12505f11c75d",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v5.3.2/info.json b/schemes/artic/400/v5.3.2/info.json
@@ -22,8 +22,8 @@
     "citations": [
         "https://doi.org/10.1101%2F2020.09.04.283077"
     ],
-    "primer_checksum": "primaschema:bed:80ee08c1d15a2921",
-    "primer_file_sha256": "sha256:f13eece08d84f9cb6ebec9735746779bb5d12167aac8b47448627d1faa75eea8",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "f13eece08d84f9cb6ebec9735746779bb5d12167aac8b47448627d1faa75eea8",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/artic/400/v5.4.2/info.json b/schemes/artic/400/v5.4.2/info.json
@@ -22,8 +22,8 @@
     "citations": [
         "https://doi.org/10.1101%2F2020.09.04.283077"
     ],
-    "primer_checksum": "primaschema:bed:c62c57a5252f2db9",
-    "primer_file_sha256": "sha256:6571cffa29dc9c2a41053e9c3a6eb6bbffac8b20449e241099564b74b7455432",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "6571cffa29dc9c2a41053e9c3a6eb6bbffac8b20449e241099564b74b7455432",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/eden/2500/v1.0.0/info.json b/schemes/eden/2500/v1.0.0/info.json
@@ -27,8 +27,8 @@
     "notes": [
         "Protocol includes addendum for ONT sequencing"
     ],
-    "primer_checksum": "primaschema:bed:26fc59b9ca5c4b8a",
-    "primer_file_sha256": "sha256:3816cc533ef389761caedb13b9629a665fd9131af61227957c32289050067e4b",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
-}
+    "checksums": {
+        "primer_sha256": "3816cc533ef389761caedb13b9629a665fd9131af61227957c32289050067e4b",
+        "reference_sha256": "b09a4a3d6824dc4a9f3a17d480f3335f73cb1507897f6dad0de871e8f00d8637"
+    }
+}
diff --git a/schemes/midnight/1200/v1.0.0-bccdc/info.json b/schemes/midnight/1200/v1.0.0-bccdc/info.json
@@ -31,8 +31,8 @@
     "notes": [
         "Accomodates P.1"
     ],
-    "primer_checksum": "primaschema:bed:fd113c5c84e33e65",
-    "primer_file_sha256": "sha256:ff7fd0957777aa991e5ba4273e0c3cdea8dd091b0cb1078dc0fd23aca5a90634",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
-}
+    "checksums": {
+        "primer_sha256": "ff7fd0957777aa991e5ba4273e0c3cdea8dd091b0cb1078dc0fd23aca5a90634",
+        "reference_sha256": "4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
+    }
+}
diff --git a/schemes/midnight/1200/v1.0.0/info.json b/schemes/midnight/1200/v1.0.0/info.json
@@ -35,8 +35,8 @@
             "organisation_name": "Integrated DNA Technologies"
         }
     ],
-    "primer_checksum": "primaschema:bed:b900ecae45957c5c",
-    "primer_file_sha256": "sha256:7a9bac73b1eb9244e29788247f1ba1fa0d40e0f478a97e72cd3ab4fe745677e0",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
-}
+    "checksums": {
+        "primer_sha256": "7a9bac73b1eb9244e29788247f1ba1fa0d40e0f478a97e72cd3ab4fe745677e0",
+        "reference_sha256": "4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
+    }
+}
diff --git a/schemes/midnight/1200/v2.0.0-bccdc/info.json b/schemes/midnight/1200/v2.0.0-bccdc/info.json
@@ -31,8 +31,8 @@
     "notes": [
         "Accomodates BA.1"
     ],
-    "primer_checksum": "primaschema:bed:5e53a595adbfa75b",
-    "primer_file_sha256": "sha256:d3b7c27c01c87a604a9648b180db25b170ec2629e8395a4d698bf5965f6a302e",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
-}
+    "checksums": {
+        "primer_sha256": "d3b7c27c01c87a604a9648b180db25b170ec2629e8395a4d698bf5965f6a302e",
+        "reference_sha256": "4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
+    }
+}
diff --git a/schemes/midnight/1200/v2.0.0/info.json b/schemes/midnight/1200/v2.0.0/info.json
@@ -38,8 +38,8 @@
             "kit_name": "MRT001.20"
         }
     ],
-    "primer_checksum": "primaschema:bed:d4013ab2aca6b292",
-    "primer_file_sha256": "sha256:e48d23b772a7c89826b74efcd55ab07ccc586ad95ee13260ff7772db1320df7a",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
-}
+    "checksums": {
+        "primer_sha256": "e48d23b772a7c89826b74efcd55ab07ccc586ad95ee13260ff7772db1320df7a",
+        "reference_sha256": "4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
+    }
+}
diff --git a/schemes/midnight/1200/v3.0.0-bccdc/info.json b/schemes/midnight/1200/v3.0.0-bccdc/info.json
@@ -28,8 +28,8 @@
     "citations": [
         "https://dx.doi.org/10.17504/protocols.io.bwyppfvn"
     ],
-    "primer_checksum": "primaschema:bed:e3dbcac2ea506342",
-    "primer_file_sha256": "sha256:1a0ee6df04ccb4752800908833014022bca52386635a46832c7b5c3e847700f1",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
-}
+    "checksums": {
+        "primer_sha256": "1a0ee6df04ccb4752800908833014022bca52386635a46832c7b5c3e847700f1",
+        "reference_sha256": "4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
+    }
+}
diff --git a/schemes/midnight/1200/v3.0.0-ont/info.json b/schemes/midnight/1200/v3.0.0-ont/info.json
@@ -37,8 +37,8 @@
             "kit_name": "MRT001.30"
         }
     ],
-    "primer_checksum": "primaschema:bed:c34e6683815812c1",
-    "primer_file_sha256": "sha256:b6d7b3a05988aad424b2a0de3bf70e0cc5762cd56efe813b48d894dacc15c657",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
-}
+    "checksums": {
+        "primer_sha256": "b6d7b3a05988aad424b2a0de3bf70e0cc5762cd56efe813b48d894dacc15c657",
+        "reference_sha256": "4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
+    }
+}
diff --git a/schemes/midnight/1200/v4.0.0-bccdc/info.json b/schemes/midnight/1200/v4.0.0-bccdc/info.json
@@ -35,8 +35,8 @@
         "Accomodates Omicron BA.2",
         "IDT calls this the \"-Midnight-1200 Amplicon Panel\" and \"Midnight Amplicon Panel v2\""
     ],
-    "primer_checksum": "primaschema:bed:9d581c5d6a74c274",
-    "primer_file_sha256": "sha256:277fb80daf5d462369069508237a400677079c4c554e23506b5915ace9570aff",
-    "reference_checksum": "primaschema:ref:21c16fc69acb3b9e",
-    "reference_file_sha256": "sha256:4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
-}
+    "checksums": {
+        "primer_sha256": "277fb80daf5d462369069508237a400677079c4c554e23506b5915ace9570aff",
+        "reference_sha256": "4e43298c083d3da7bfbab890e351e3e58015f9bd7fac1bdee097d11ac89f785d"
+    }
+}
diff --git a/schemes/nipah/400/v1.0.0/info.json b/schemes/nipah/400/v1.0.0/info.json
@@ -15,8 +15,8 @@
     ],
     "license": "CC-BY-SA-4.0",
     "status": "DRAFT",
-    "primer_checksum": "primaschema:bed:e591434473d5dcfa",
-    "primer_file_sha256": "sha256:36a2c996015a04344dc700142a43586d84c11b7c27dee62e25079e08f14e6e43",
-    "reference_checksum": "primaschema:ref:905352d587958359",
-    "reference_file_sha256": "sha256:815c8701e321c2a488e43d70300d0dfbd0a8deb088e784d23935cabf54892a3d"
-}
+    "checksums": {
+        "primer_sha256": "36a2c996015a04344dc700142a43586d84c11b7c27dee62e25079e08f14e6e43",
+        "reference_sha256": "815c8701e321c2a488e43d70300d0dfbd0a8deb088e784d23935cabf54892a3d"
+    }
+}
diff --git a/schemes/rigshospitalet/2500/v1.0.0/info.json b/schemes/rigshospitalet/2500/v1.0.0/info.json
@@ -30,8 +30,8 @@
     "citations": [
         "https://www.protocols.io/view/monkeypox-virus-whole-genome-sequencing-using-comb-n2bvj6155lk5"
     ],
-    "primer_checksum": "primaschema:bed:937046042306d5cc",
-    "primer_file_sha256": "sha256:491b706b69f776d4733c2be0f61ccc89e69164d7ccc4a0f0aedd7652d047fe24",
-    "reference_checksum": "primaschema:ref:a038d0277ea6ab05",
-    "reference_file_sha256": "sha256:2415f80de820bcbffddebbb919e8c23e14496932555f73ca5f0705b752b86966"
-}
+    "checksums": {
+        "primer_sha256": "491b706b69f776d4733c2be0f61ccc89e69164d7ccc4a0f0aedd7652d047fe24",
+        "reference_sha256": "2415f80de820bcbffddebbb919e8c23e14496932555f73ca5f0705b752b86966"
+    }
+}
diff --git a/schemes/yale/2000/v1.0.0/info.json b/schemes/yale/2000/v1.0.0/info.json
@@ -78,8 +78,8 @@
             "kit_name": "Yale hMPXV Amplicon Panel"
         }
     ],
-    "primer_checksum": "primaschema:bed:a0049d0a3403be46",
-    "primer_file_sha256": "sha256:6c94a47215a929d6688c706559e5f3cc4c75420cc7787cee7cfcb3df344a4cfe",
-    "reference_checksum": "primaschema:ref:a98c4dee0d139679",
-    "reference_file_sha256": "sha256:d89e86982a1c513206c4d219d20da23de32e98d4370a89eb928713d8ea9fd46a"
-}
+    "checksums": {
+        "primer_sha256": "6c94a47215a929d6688c706559e5f3cc4c75420cc7787cee7cfcb3df344a4cfe",
+        "reference_sha256": "d89e86982a1c513206c4d219d20da23de32e98d4370a89eb928713d8ea9fd46a"
+    }
+}
