Skip to content

Navigation Menu

Appearance settings

parklab

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

Park Lab at Harvard Medical School

31 followers
Boston, MA
http://compbio.hms.harvard.edu

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

nozzle nozzle Public

Nozzle is a report generation toolkit for data analysis pipelines implemented in R.

R 68 20
NGSCheckMate NGSCheckMate Public

Software program for checking sample matching for NGS data

Python 134 56
SigMA SigMA Public

Mutational signature analysis for low statistics SNV data

R 64 21

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All C C++ CSS HTML JavaScript Jupyter Notebook Perl Python R Shell TeX

Sort

Select order

Last updated Name Stars

Showing 10 of 42 repositories

parklab.github.io Public

parklab/parklab.github.io’s past year of commit activity

HTML 0 1 0 2 Updated Aug 6, 2025
r-scan2 Public
R package supporting the SCAN2 pipeline

parklab/r-scan2’s past year of commit activity

R 0 4 1 0 Updated Aug 4, 2025
bamsnap Public

parklab/bamsnap’s past year of commit activity

HTML 123 MIT 27 20 0 Updated Aug 1, 2025
SPECIFICANCER_data Public

parklab/SPECIFICANCER_data’s past year of commit activity

JavaScript 0 MIT 0 0 0 Updated Jul 30, 2025
HiScanner Public

parklab/HiScanner’s past year of commit activity

C 7 MIT 2 1 0 Updated Jul 29, 2025
SCAN2 Public
SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)

parklab/SCAN2’s past year of commit activity

Python 14 6 12 0 Updated Jul 28, 2025
ViScanner Public
Scanner output visualization tool

parklab/ViScanner’s past year of commit activity

JavaScript 0 0 0 0 Updated Jul 15, 2025
r-mutenrich Public
Analyze distribution of somatic mutations with permutations as a background

parklab/r-mutenrich’s past year of commit activity

R 0 0 0 0 Updated Jul 7, 2025
xTea Public
Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics

parklab/xTea’s past year of commit activity

Python 115 22 9 2 Updated Jul 4, 2025
hiscanner_demo Public

parklab/hiscanner_demo’s past year of commit activity

2 MIT 0 0 0 Updated Jul 1, 2025

View all repositories

People

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Footer

© 2025 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.