Refs #114. added another test script

ornlneutronimaging · Sep 11, 2018 · 76ce4fb · 76ce4fb
1 parent 7c0f07f
commit 76ce4fb
Show file tree

Hide file tree

Showing 5 changed files with 22 additions and 9 deletions.
diff --git a/tests/autorecon/Test0.py b/tests/autorecon/Test0.py
@@ -3,21 +3,18 @@
 """Test basic functionality:
 
 * skip reconstruction when CT is not done
-* strart reconstruction when working on last CT file
 """
 
 import os, glob
 from imars3d.CT_from_TIFF_metadata import autoreduce
 
-ct_file_path = "/HFIR/CG1D/IPTS-21115/raw/ct_scans/July26_2018/20180727_Huggies_bottom_0015_359_445_2319.tiff"
-autoreduce(ct_file_path, local_disk_partition='/tmp', parallel_nodes=20)
-
 
 dir = "/HFIR/CG1D/IPTS-21115/raw/ct_scans/July26_2018/"
 files = glob.glob(os.path.join(dir, '*.tiff'))
 
-for f in files:
+for f in files[:5]:
     autoreduce(f, local_disk_partition='/tmp', parallel_nodes=20)
 
-# ct_file_path = "/HFIR/CG1D/IPTS-21115/raw/ct_scans/July26_2018/20180727_Huggies_bottom_0015_359_910_2322.tiff"
-# autoreduce(ct_file_path, local_disk_partition='/tmp', parallel_nodes=20)
+
+ct_file_path = "/HFIR/CG1D/IPTS-21115/raw/ct_scans/July26_2018/20180727_Huggies_bottom_0015_359_445_2319.tiff"
+autoreduce(ct_file_path, local_disk_partition='/tmp', parallel_nodes=20)
diff --git a/tests/autorecon/Test_OB.py b/tests/autorecon/Test_OB.py
@@ -0,0 +1,12 @@
+#!/usr/bin/env python
+import os, glob
+from imars3d.CT_from_TIFF_metadata import autoreduce
+
+
+ct_file_path = "/HFIR/CG1D/IPTS-20343/raw/ct_scans/20180905/20180906_CT_0042_183_000_1108.tiff"
+autoreduce(
+    ct_file_path,
+    local_disk_partition='/SNSlocal2', 
+    # clean_intermediate_files='archive',
+    outdir='/HFIR/CG1D/IPTS-20343/shared/autoreduce/test',
+    parallel_nodes=20)
diff --git a/tests/autorecon/Test_center.py b/tests/autorecon/Test_center.py
@@ -1,4 +1,6 @@
 #!/usr/bin/env python
+# This test can only be ran after "Test_flower.py" was run
+
 import os, glob, numpy as np
 from imars3d import tilt
 

diff --git a/tests/autorecon/Test_diapers.py b/tests/autorecon/Test_diapers.py
@@ -8,6 +8,6 @@
 autoreduce(
     ct_file_path,
     local_disk_partition='/SNSlocal2', 
-    clean_intermediate_files='archive',
-    outdir='/HFIR/CG1D/IPTS-21115/shared/autoreduce/CT-group-2495.test',
+    # clean_intermediate_files='archive',
+    outdir='/HFIR/CG1D/IPTS-21115/shared/autoreduce/CT-group-2495.test2',
     parallel_nodes=20)
diff --git a/tests/autorecon/Test_tilt.py b/tests/autorecon/Test_tilt.py
@@ -1,4 +1,6 @@
 #!/usr/bin/env python
+# This test can only be ran after "Test_flower.py" was run
+
 import os, glob, numpy as np
 from imars3d import tilt