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    8 repositories

    • tracespipe

      Public
      Reconstruction and analysis of viral and host genomes at multi-organ level
      viruspipelinengsclinicalmetagenomicsforensicsvirologyngs-pipelinemtdnamulti-organ
      Shell
      •
      GNU General Public License v3.0
      •7•22•1•0•Updated Jul 3, 2025Jul 3, 2025

    • HVRS

      Public
      Comparative evaluation of computational methods for reconstruction of human viral genomes
      Shell
      •
      GNU General Public License v3.0
      •0•4•0•0•Updated Jul 3, 2025Jul 3, 2025

    • TRACESPipeLite

      Public
      TRACESPipeLite: ultra-fast assembly of viral genomes from FASTQ reads
      Shell
      •
      MIT License
      •2•3•0•0•Updated May 23, 2025May 23, 2025

    • CoopPipe

      Public
      Cooperative Pipeline for human viral genome reconstruction
      Shell
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Feb 20, 2025Feb 20, 2025

    • amtDNA-Authenticator

      Public
      Python
      •0•1•0•0•Updated Feb 19, 2025Feb 19, 2025

    • aDNA-Classification-Pipeline

      Public
      Python
      •0•1•0•0•Updated Nov 15, 2024Nov 15, 2024

    • viromelab.github.io

      Public
      ViromeLab Web
      HTML
      •
      MIT License
      •0•0•0•10•Updated Apr 1, 2023Apr 1, 2023

    • TRACESPipeDeNovo

      Public
      TRACESPipeDeNovo: de-novo assembly and classification of viral genomes from FASTQ reads
      Shell
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Oct 24, 2022Oct 24, 2022