Repositories list

• shell-novice

  Public
  The Unix Shell

  Shell

  •

  Other

  •1k•0•0•0•Updated Mar 3, 2026Mar 3, 2026

• genomics-r-intro

  Public
  Intro to R and RStudio for Genomics

  R

  •

  Other

  •92•0•0•0•Updated Mar 3, 2026Mar 3, 2026

• tfbs_lab

  Public
  Python

  •1•0•0•0•Updated Sep 17, 2025Sep 17, 2025

• rna_seq_lesson

  Public
  Website for "Introduction to RNA-Seq analysis"

  HTML

  •

  MIT License

  •0•0•0•0•Updated Sep 5, 2025Sep 5, 2025

• compbio2025

  Public
  BIMS 8701 / BIMS 8702: Introduction to Computational Biology I/II

  HTML

  •3•0•0•0•Updated Aug 28, 2025Aug 28, 2025

• compbio2024

  Public
  BIMS 8701 / BIMS 8702: Introduction to Computational Biology I/II

  HTML

  •3•0•0•0•Updated Apr 30, 2025Apr 30, 2025

• phylogenetics_lab

  Public
  1•0•0•0•Updated Mar 17, 2025Mar 17, 2025

• genome_assembler

  Public
  Components of a genome assembler

  Python

  •5•0•0•0•Updated Feb 24, 2025Feb 24, 2025

• sequence_alignment

  Public
  Python

  •7•0•0•0•Updated Feb 20, 2025Feb 20, 2025

• network_analysis

  Public
  R

  •0•0•0•0•Updated Apr 24, 2024Apr 24, 2024

• hmm_lab

  Public
  Python

  •0•0•0•0•Updated Apr 17, 2024Apr 17, 2024

• scribe

  Public
  Makefile

  •7•1•1•0•Updated Jun 28, 2023Jun 28, 2023

• compgen2022

  Public
  Course website and slides for BIMS 8106, Foundations of Computational Genomics

  HTML

  •4•0•0•0•Updated Jul 10, 2022Jul 10, 2022

• kmer-counting

  Public template
  R

  •1•0•0•0•Updated Apr 19, 2022Apr 19, 2022

• interval_basics

  Public
  R

  •3•0•0•0•Updated Apr 12, 2022Apr 12, 2022

• cphg-welcome

  Public
  A portal to welcome new programmers to CPHG at UVa

  Shell

  •1•4•1•0•Updated Nov 16, 2020Nov 16, 2020