Repositories list

• misconception-paper-2025

  Public
  Scripts and Data associated Galaxy Misconception Paper 2025

  MIT License

  •0•0•0•0•Updated Sep 1, 2025Sep 1, 2025

• infrastructure-playbook

  Public
  Ansible playbook for managing UseGalaxy.eu infrastructure.

  ansible

  Jinja

  •

  MIT License

  •107•22•24•36•Updated Sep 1, 2025Sep 1, 2025

• galaxy-social-assistant

  Public
  Python

  •

  MIT License

  •1•0•1•1•Updated Sep 1, 2025Sep 1, 2025

• galaxy

  Public
  Data intensive science for everyone.

  Python

  •

  Other

  •1.1k•6•8•2•Updated Sep 1, 2025Sep 1, 2025

• vgcn-infrastructure

  Public
  Manage the VGCN Infrastructure https://github.com/usegalaxy-eu/vgcn/

  Python

  •

  GNU General Public License v3.0

  •7•5•1•5•Updated Sep 1, 2025Sep 1, 2025

• usegalaxy-eu-tools

  Public
  List of tools included in https://usegalaxy.eu

  toolsgalaxyproject

  Python

  •

  MIT License

  •145•33•38•7•Updated Sep 1, 2025Sep 1, 2025

• docker-pretextview

  Public
  Dockerfile

  •

  MIT License

  •0•0•0•0•Updated Sep 1, 2025Sep 1, 2025

• FAIRyMAGs

  Public
  FAIRyMAGs - BFSP Project Management

  Jupyter Notebook

  •

  MIT License

  •2•1•49•0•Updated Sep 1, 2025Sep 1, 2025

• usegalaxy-eu.github.io

  Public
  Deployed website (source is in https://github.com/usegalaxy-eu/website )

  HTML

  •

  MIT License

  •3•1•0•2•Updated Sep 1, 2025Sep 1, 2025

• website

  Public
  UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)

  TeX

  •

  MIT License

  •118•21•29•8•Updated Sep 1, 2025Sep 1, 2025

• microbiology_galaxy_lab_paper_2025

  Public
  Scripts and data associated with Microbiology Galaxy Lab and microGalaxy 2025 Paper

  Jupyter Notebook

  •

  MIT License

  •3•2•8•4•Updated Aug 30, 2025Aug 30, 2025

• intergalactic-most-wanted-list

  Public
  A database for malware checksums for use with the WallE malware cleanup script

  MIT License

  •2•1•0•0•Updated Aug 29, 2025Aug 29, 2025

• vgcn-infrastructure-playbook

  Public
  Ansible playbook for configuring PXE baremetal VGCN nodes after boot and for updating HTCondor and Mountpoints

  Jinja

  •

  MIT License

  •0•0•0•1•Updated Aug 28, 2025Aug 28, 2025

• galaxy-social

  Public
  Repository for democratising of Galaxy's social media activity - encourage collaboration, editing, peer-review of toots 🐘 and more

  Python

  •

  Creative Commons Zero v1.0 Universal

  •10•9•15•97•Updated Aug 26, 2025Aug 26, 2025

• ansible-rustus

  Public
  Ansible role for installing rustus, a TUS protocol implementation written in Rust.

  Jinja

  •

  MIT License

  •1•1•1•0•Updated Aug 26, 2025Aug 26, 2025

• docker-coastal-source

  Public
  Docker container for Sea Observations Utility for Reprocessing, Calibration and Evaluation (SOURCE)

  Python

  •

  MIT License

  •0•0•0•1•Updated Aug 21, 2025Aug 21, 2025

• vgcn

  Public
  Virtual Galaxy Compute Nodes (vgcn)

  ansiblebioinformaticspacker+ 2virtualizationusegalaxy

  Python

  •9•6•6•4•Updated Aug 20, 2025Aug 20, 2025

• operations

  Public
  usegalaxy.eu operations

  documentationoperationsusegalaxy-eu+ 1usegalaxy

  Shell

  •

  Creative Commons Attribution 4.0 International

  •8•4•3•3•Updated Aug 20, 2025Aug 20, 2025

• docker-vpt

  Public
  Docker image with VPT (The Vizgen Post-processing Tool)

  Dockerfile

  •

  MIT License

  •0•1•0•0•Updated Aug 9, 2025Aug 9, 2025

• ansible-collection-handy

  Public
  Python

  •

  MIT License

  •3•2•1•1•Updated Aug 8, 2025Aug 8, 2025

• docker-napari

  Public
  Dockerfile

  •

  MIT License

  •0•2•0•1•Updated Aug 8, 2025Aug 8, 2025

• infrastructure

  Public
  All of Galaxyproject EU's cloud infrastructure.

  HCL

  •

  MIT License

  •26•9•1•2•Updated Aug 1, 2025Aug 1, 2025

• pxe-config-playbook

  Public
  Test repository for vgcn-infrastructure playbook

  Jinja

  •0•0•2•0•Updated Jul 29, 2025Jul 29, 2025

• ena-upload-cli

  Public
  ENA upload cli - script your Open Data upload to the European Nucleotide Archive

  Python

  •

  MIT License

  •17•28•11•0•Updated Jul 28, 2025Jul 28, 2025

• temporary-tools

  Public
  Non-reproducible, local tools that were installed to cn029

  HTML

  •

  MIT License

  •7•1•0•0•Updated Jul 24, 2025Jul 24, 2025

• ansible-fw-glxeu-generic

  Public
  Generic firewall setup for usegalaxy-eu

  MIT License

  •1•0•0•2•Updated Jul 23, 2025Jul 23, 2025

• ansible-dnbd3

  Public
  Ansible role that sets up a DNBD3 server or proxy

  Jinja

  •0•0•0•0•Updated Jul 22, 2025Jul 22, 2025

• branding

  Public
  Branding resources

  SCSS

  •

  Creative Commons Attribution 4.0 International

  •5•4•5•4•Updated Jul 18, 2025Jul 18, 2025

• ansible-tftp

  Public
  Ansible role that sets up a TFTP server

  Jinja

  •

  MIT License

  •0•1•0•0•Updated Jul 15, 2025Jul 15, 2025

• docker-whisper

  Public
  Docker image for running OpenAi whisper tool in the @Galaxy

  Dockerfile

  •

  MIT License

  •0•0•0•0•Updated Jul 14, 2025Jul 14, 2025