Repositories list

• hubmap-clt

  Public archive
  The HuBMAP Command Line Transfer application

  Python

  •

  MIT License

  •0•1•7•0•Updated Jul 2, 2024Jul 2, 2024

• software-docs

  Public archive
  JavaScript

  •2•2•23•2•Updated Jun 13, 2024Jun 13, 2024

• asctb-ct-label-mapper

  Public archive
  asctb-ct-label-mapper: A package to recommend controlled vocabulary for annotations of scRNA-seq datasets. and thereby enable cross-dataset or cross-experiment comparison of annotations.

  pythonnatural-language-processingdata-engineering+ 6web-scrapingcosine-similaritysingle-cell-rna-seqbert-modelembeddings-similarityhuman-reference-atlas

  Python

  •

  MIT License

  •1•2•2•0•Updated May 16, 2023May 16, 2023

• vccf-visualization-release

  Public archive
  VCCF Visualization Demo

  human-reference-atlas

  HTML

  •1•0•0•0•Updated Apr 7, 2023Apr 7, 2023

• mibi-pipeline-orig

  Public archive
  Python

  •

  GNU General Public License v3.0

  •0•0•5•0•Updated Jan 19, 2023Jan 19, 2023

• hra-azimuth-predictions

  Public archive
  HRA Azimuth predictions research

  human-reference-atlas

  R

  •

  GNU General Public License v3.0

  •0•0•2•0•Updated Dec 16, 2022Dec 16, 2022

• Azimuth_asctb_label_comparison

  Public archive
  Azimuth ASCT+B label comparison

  human-reference-atlas

  Python

  •

  MIT License

  •0•0•0•0•Updated Dec 7, 2022Dec 7, 2022

• ccf-2d-reference-object-library

  Public archive
  HRA 2D Reference Object Library (Source)

  human-reference-atlas

  Creative Commons Attribution 4.0 International

  •2•0•1•0•Updated Nov 30, 2022Nov 30, 2022

• asctb-azimuth-data-comparison

  Public archive
  Comparing Azimuth data with ASCT+B Table data

  human-reference-atlas

  R

  •2•3•1•0•Updated Nov 27, 2022Nov 27, 2022

• ontology-api

  Public archive
  The HuBMAP Ontology Service

  Python

  •

  MIT License

  •3•4•6•0•Updated Nov 16, 2022Nov 16, 2022

• hra-docms

  Public archive
  HRA Digital Object Construction & Management System (DO-CMS)

  human-reference-atlas

  TypeScript

  •

  MIT License

  •0•0•58•0•Updated Oct 18, 2022Oct 18, 2022

• ccf-sparc-pilot

  Public archive
  Project page for the CCF-SPARC Pilot collaboration

  human-reference-atlas

  HTML

  •

  MIT License

  •0•0•0•0•Updated Oct 4, 2022Oct 4, 2022

• ccf-body-ui

  Public archive
  ccf-body-ui in Unity

  human-reference-atlas

  0•0•0•0•Updated Jul 7, 2022Jul 7, 2022

• hubmap-translation

  Public archive
  Python

  •0•0•0•1•Updated Jun 6, 2022Jun 6, 2022

• portal-docs

  Public archive
  Markdown documentation to be displayed in the Portal

  portaluser-interfacegehlenborglab

  MIT License

  •5•1•0•0•Updated Jan 12, 2022Jan 12, 2022

• asctb-ftu-mapping

  Public archive
  ASCT+B to FTU Mapping

  human-reference-atlas

  0•0•0•0•Updated Dec 17, 2021Dec 17, 2021

• hubmap-api-js-client

  Public archive
  Javascript client for the Cells API

  gehlenborglab

  JavaScript

  •

  MIT License

  •0•0•1•4•Updated Aug 10, 2021Aug 10, 2021

• ccf-3d-registration

  Public archive
  CCF-RUI: CCF Registration User Interface

  human-reference-atlas

  C#

  •0•0•9•0•Updated Jul 1, 2020Jul 1, 2020

• hubmap-data-portal

  Public archive
  Data portal for the NIH HuBMAP Consortium.

  JavaScript

  •

  MIT License

  •0•3•14•10•Updated Dec 4, 2019Dec 4, 2019