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    11 repositories

    • dahak-metagenomics.github.io

      Public
      Top-level organization web page for dahak metagenomics organization. https://dahak-metagenomics.github.io
      BSD 3-Clause "New" or "Revised" License
      •0•0•1•0•Updated May 16, 2022May 16, 2022

    • dahak-yeti

      Public
      👹 Use Ansible to prepare remote machines to run dahak workflows.
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•1•1•Updated Dec 19, 2018Dec 19, 2018

    • dahak

      Public
      benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
      Jupyter Notebook
      •
      BSD 3-Clause "New" or "Revised" License
      •4•21•33•2•Updated Sep 21, 2018Sep 21, 2018

    • taco-taxonomic-classification

      Public
      A taco workflow repo for taxonomic classification. https://dahak-metagenomics.github.io/taco-taxonomic-classification
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jul 27, 2018Jul 27, 2018

    • taco-read-filtering

      Public
      A dahak-taco workflow repo for read filtering. https://dahak-metagenomics.github.io/taco-read-filtering
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Jul 27, 2018Jul 27, 2018

    • taco-simple

      Public
      A dahak-taco workflow repo to illustrate simple "hello world" workflow definitions. Not-so-simple? More like taco-simple. https://dahak-metagenomics.github.io/taco-simple
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•1•0•Updated Jul 27, 2018Jul 27, 2018

    • dahak-spy

      Public
      🕵️ Setup scripts for spy, a monitoring and database server for dahak workflows.
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•2•0•Updated Jul 27, 2018Jul 27, 2018

    • dahak-map

      Public
      🗺️ A roadmap for all the dahak repos. WARNING: the dahak repos have become self-aware and are replicating.
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jul 27, 2018Jul 27, 2018

    • dahak-taco

      Public
      🌮 Taco is an experimental command line interface for dahak workflows. https://dahak-metagenomics.github.io/dahak-taco
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•18•0•Updated Jul 27, 2018Jul 27, 2018

    • dahak-bespin

      Public
      ☁️ Bespin is a command line interface for requesting AWS resources for dahak workflows from the command line.
      HCL
      •0•0•0•0•Updated Mar 30, 2018Mar 30, 2018

    • dahak-flot

      Public archive
      🚰 Snakemake files for dahak workflows. (This repo will be absorbed into dahak-taco.)
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated Mar 21, 2018Mar 21, 2018