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    7 repositories

    • safepy

      Public
      Python implementation of Spatial Analysis of Functional Enrichment (SAFE)
      bioinformaticscomputational-biologynetwork-analysisenrichment-analysis
      Python
      •
      GNU General Public License v3.0
      •24•39•4•2•Updated Feb 6, 2024Feb 6, 2024

    • platometer

      Public
      Python package to quantify colony sizes in arrayed microbial growth experiments
      Python
      •
      GNU General Public License v3.0
      •0•1•0•2•Updated Sep 29, 2023Sep 29, 2023

    • safe-data

      Public
      Contains the sample input and output files for SAFE demos and tutorials
      2•2•0•0•Updated Feb 28, 2023Feb 28, 2023

    • baryshnikova-lab.github.io

      Public
      HTML
      •0•0•0•0•Updated Jan 11, 2023Jan 11, 2023

    • YeastPhenome.org

      Public
      Python
      •0•1•3•2•Updated Jun 21, 2022Jun 21, 2022

    • Yeast-Matlab-Utils

      Public
      A set of useful Matlab functions for bioinformatic analysis in yeast Saccharomyces cerevisiae.
      MATLAB
      •0•0•0•0•Updated Apr 15, 2017Apr 15, 2017

    • safe-java

      Public
      Spatial Analysis of Functional Enrichment (SAFE)
      Java
      •
      MIT License
      •3•4•0•0•Updated Feb 18, 2017Feb 18, 2017