{"payload":{"pageCount":3,"repositories":[{"type":"Public","name":"WALS","owner":"DEIB-GECO","isFork":false,"description":"Repository for the website of the International Workshop of Web Applications for Life Sciences, co-located with ICWE 2022","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-11T12:02:46.099Z"}},{"type":"Public","name":"cmls2024","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-06-10T08:35:50.870Z"}},{"type":"Public","name":"CMLS","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":20,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-05-15T10:24:17.423Z"}},{"type":"Public","name":"ARDS_H-CPAP_ML","owner":"DEIB-GECO","isFork":false,"description":"Machine learning-based forecast of Helmet-CPAP therapy failure in Acute Respiratory Distress Syndrome patients","allTopics":["machine-learning","covid-19","acute-respiratory-distress-syndrome","helmet-continuous-positive-airway-pressure","predicting-h-cpap-therapy-failure-in-ards-patients"],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-28T15:18:54.964Z"}},{"type":"Public","name":"GIS-weigthed_LASSO","owner":"DEIB-GECO","isFork":false,"description":"Integrative approach to feature selection combining weighted LASSO and prior biological knowldge","allTopics":["lasso","feature-selection","classification","gene-expression-profiles","prior-knowledge"],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-03-18T20:59:59.487Z"}},{"type":"Public","name":"RGMQL","owner":"DEIB-GECO","isFork":false,"description":"RGMQL: Scalable and interoperable computing of heterogeneous omics big data and metadata in R/Bioconductor","allTopics":["package","r","bioconductor","scalable-computing","interopeable-computing","heterogeneous-omics-data","java"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":2,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-13T19:54:33.931Z"}},{"type":"Public","name":"MULTI-STAR","owner":"DEIB-GECO","isFork":false,"description":"Multi-label subtyping and advanced recognition on cancer patients","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-01-06T00:29:13.077Z"}},{"type":"Public","name":"GeCo","owner":"DEIB-GECO","isFork":false,"description":"geco webpage","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":6,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-08T10:40:54.122Z"}},{"type":"Public","name":"nmtf-web","owner":"DEIB-GECO","isFork":false,"description":"Documentation","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-09-03T20:33:46.680Z"}},{"type":"Public","name":"ReRa","owner":"DEIB-GECO","isFork":false,"description":"Supervised Relevance-Redundancy assessments for feature selection in omics-based classification","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-23T07:39:21.382Z"}},{"type":"Public","name":"GMQL-Sync","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Shell","color":"#89e051"},"pullRequestCount":2,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-22T10:31:36.547Z"}},{"type":"Public","name":"TFHAZ","owner":"DEIB-GECO","isFork":false,"description":"R package to identify Transcription Factor High Accumulation DNA Zones ","allTopics":[],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-10T20:38:39.393Z"}},{"type":"Public","name":"Metadata-Manager","owner":"DEIB-GECO","isFork":false,"description":"Public dataset downloader for GMQL framework","allTopics":["dataset","transformer","gmql-importer"],"primaryLanguage":{"name":"Scala","color":"#c22d40"},"pullRequestCount":7,"issueCount":1,"starsCount":7,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-07-07T21:30:40.097Z"}},{"type":"Public","name":"DSBot","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":1,"starsCount":0,"forksCount":3,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-03T10:04:39.997Z"}},{"type":"Public","name":"VarSum","owner":"DEIB-GECO","isFork":false,"description":"Data summarization tool for 1000 Genomes Project data","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":1,"issueCount":0,"starsCount":0,"forksCount":1,"license":"GNU General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-05-01T21:21:34.329Z"}},{"type":"Public","name":"VariantHunter","owner":"DEIB-GECO","isFork":true,"description":"VariantHunter is a tool for fast detection of emerging SARS-CoV-2 variants. It's an highly flexible and user friendly application for the systematic monitoring of the evolution of SARS-CoV-2 both at global and regional level.","allTopics":["nextstrain","sars-cov-2","covid19-data","gisaid","sars-cov-2-variants"],"primaryLanguage":{"name":"Vue","color":"#41b883"},"pullRequestCount":0,"issueCount":0,"starsCount":5,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-23T09:36:18.742Z"}},{"type":"Public","name":"virusurf_downloader","owner":"DEIB-GECO","isFork":false,"description":"virusurf downloader","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":7,"issueCount":0,"starsCount":3,"forksCount":3,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-10T22:48:30.462Z"}},{"type":"Public","name":"geco_agent_loader","owner":"DEIB-GECO","isFork":false,"description":"GeCo-5.0","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":3,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-07T23:16:58.899Z"}},{"type":"Public","name":"MutViz","owner":"DEIB-GECO","isFork":false,"description":"MutViz - Analysis and Visualization of Mutation Enrichments for Selected Genomic Regions and Cancer Types","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":3,"issueCount":0,"starsCount":3,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-02-02T06:37:27.842Z"}},{"type":"Public","name":"vue-metadata","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Vue","color":"#41b883"},"pullRequestCount":23,"issueCount":0,"starsCount":0,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-30T01:00:43.326Z"}},{"type":"Public","name":"GeCo-5.0","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":43,"issueCount":0,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-08T10:17:12.488Z"}},{"type":"Public","name":"GeneNetFusion","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":["complex-networks","gene-network-inference","gene-expression-profiles","biomarkers","co-expression","network-fusion"],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":10,"issueCount":0,"starsCount":1,"forksCount":4,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-08T10:06:35.872Z"}},{"type":"Public","name":"flask-metadata","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"JavaScript","color":"#f1e05a"},"pullRequestCount":4,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-08T01:52:04.144Z"}},{"type":"Public","name":"ViruClust","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":2,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-11-04T10:18:32.331Z"}},{"type":"Public","name":"EpiViruSurf","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Vue","color":"#41b883"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"GNU Affero General Public License v3.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-10-31T15:35:33.096Z"}},{"type":"Public","name":"DALS2022","owner":"DEIB-GECO","isFork":false,"description":"Repository for DALS: Data Analysis in Life Sciences, Workshop in conjunction with ECML PKDD 2022","allTopics":[],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-09-13T11:08:15.413Z"}},{"type":"Public","name":"GMQL","owner":"DEIB-GECO","isFork":false,"description":"GMQL - GenoMetric Query Language","allTopics":["bioinformatics","genomics","bigdata","data-analysis","cross-engine-execution","genomic-tertiary-analysis","data-management-engine","scala","engine","architecture","dataset","gdm","gdm-dataset-architecture","gmql-script","genometric-query-language","engine-configurations"],"primaryLanguage":{"name":"Scala","color":"#c22d40"},"pullRequestCount":5,"issueCount":11,"starsCount":17,"forksCount":11,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-05-25T23:11:11.076Z"}},{"type":"Public","name":"NMTF-link","owner":"DEIB-GECO","isFork":false,"description":"NMTF-link is designed for computing link predictions using a generalized Non-negative Matrix Tri-Factorization (NMTF) based method. ","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":3,"forksCount":2,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-05-19T16:19:43.559Z"}},{"type":"Public","name":"ShallowChrome","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-27T08:58:10.718Z"}},{"type":"Public","name":"cov2k_data_collector","owner":"DEIB-GECO","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"Apache License 2.0","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-08T16:00:44.542Z"}}],"repositoryCount":62,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"Repositories"}