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update branch #217

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wants to merge 6 commits into from
Closed

update branch #217

wants to merge 6 commits into from

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bdeadman
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bdeadman and others added 6 commits October 11, 2024 15:37
…#203)

* Miniaturised Suzuki couplings, reductive aminations, and N-alkylations (#202)

* 1440 suzuki rxns

1440 suzuki rxns from https://doi.org/10.1038/s44160-023-00351-1.

* added first subset of reductive aminations, and added name for suzuki dataset

* now with all 3 dataset files including updates to suzuki and red am

* Rogue quotation mark in description - fixed

* Delete alkylation_merge.pbtxt

* Fixed tag on core_SMILES outcome

* Added dataset name and descriptor to Suzuki

* Update submission

* Update badges

* Update badges

* Replace the Suzuki dataset

Replacement Suzuki dataset updated after review.

* Update submission

* updated reductive amination dataset to include library synthesis

* Update badges

* Update submission

* updated alkylation dataset

Updates made in response to peer review.

* Update submission

---------

Co-authored-by: github-actions <[email protected]>
Co-authored-by: Steven Kearnes <[email protected]>
…#209)

* Split ord_dataset-de0979205c84441190feef587fef8d6d into pieces (#208)

* Update badges

* Update submission

* Update badges

---------

Co-authored-by: github-actions <[email protected]>
* Set is_mined=True for USPTO data

* rerun failures
…istry (#206)

* submission 47465522 (#192)

* submission 47465522

* submission 47465522 - update details

* submission 47465522 - update pd catalyst details

* Dataset from 24Golden paper Fig 7 #194 (#197) (#205)

* Uploading dataset pbtxt for 24Golden paper Fig 7 (#194)

* Uploading dataset pbtxt for 24Golden paper Fig 7

https://doi.org/10.1016/j.chempr.2024.04.001

* Add files via upload

This is the revised .pbtxt file reviewed by @bendeadman for Fig. 7 data.

Changes made:

- Elaborated the dataset description
- Added the well identifier to reactions
- added some 'details' to the reaction identifiers and the product LC measurement to give context.
- changed the provenance html to point to the doi link (should be more permanent)

* Delete 24_Golden_Fig_7_dataset.pbtxt

* Update submission

* Remove dataset to redo pull

Count reactions workflow failing so removing the dataset to redo pull.

* added the dataset back in

* Update badges

---------

Co-authored-by: spencerheins <[email protected]>
Co-authored-by: github-actions <[email protected]>

* Revert "Dataset from 24Golden paper Fig 7 #194 (#197) (#205)"

This reverts commit 3efa3c4.

* Replace dataset with edited version

Added addition device details, and some extra details to the catalyst descriptions.

* Updated the dataset

Hopefully fixed the record created timestamp so it will pass tests.

* add dataset name and description back in

* Update record creation timestamp

Trying to avoid validation error where record created is later than record modified - possibly due to American month format!

* Update submission

* Update badges

* update file with dataset name and description

---------

Co-authored-by: Qianxiang Ai <[email protected]>
Co-authored-by: spencerheins <[email protected]>
Co-authored-by: github-actions <[email protected]>
* add dataset (#212)

Adding Doyle group Chan Lam coupling dataset on behalf of Shivaani.

* Update submission

* Update badges

---------

Co-authored-by: github-actions <[email protected]>
@bdeadman bdeadman closed this Jan 20, 2025
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2 participants