Add 2024-09-17.md

2024/2024-09-17.md

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+---
+title: '2024-09-17'
+tags: [Tuesday]
+
+---
+
+---
+tags: Tuesday
+---
+
+# 2024-09-17
+
+Attending: Will, Dom, Frances, JM, Petr, Khaled, Melissa, Seb, Kyle, Chris, Erin, Maadhav, 
+
+Start: 2:00 pm UK
+
+## Accepting minutes from [last meeting](https://hackmd.io/team/ome?nav=overview)
+
+## Project Status
+
+(2-3 minutes each)
+
+- IDR: Frances: NGFF challenge: idr0157 converted to Zarr v3. Need to check metadata (taxonomy ID)
+    - Will converting other studies
+    - OME's deadline for conversion 20th (Friday) so we have time to organise etc by end of Sept.
+
+- OMERO: JM: Insight release yesterday
+    - omero-py released yesterday too
+
+- Bio-Formats Melissa: components cleanup yesterday. OME model repo has various open issues that need addressing. Will prep review for team
+    - Sept 30th deadline for input to next release
+
+- NGFF:  Will: presentation https://docs.google.com/presentation/d/1sM0KDP3_uBgsj1fEtGQAv1UTIlaYdjZPcr9yFRWbMd0/edit#slide=id.p 
+    - also working on viz of samples via web app and now via python notebook. Some issues with zarr v3 remote support: https://github.com/zarr-developers/zarr-python/pull/2186#issuecomment-2353397673
+
+- GerBI
+
+- Glencoe
+    - Tables API corner cases poorly documented: Seb to open fixes
+    - Erin: benchmarking with new tables API. Spatial Biology meeting last week. Transcriptomics, single cell data for testing OMERO.tables. Will write blog post...
+        - JM: public tabular data would be useful for others to benchmark etc.
+    - SBI2 meeting next week, Boston. Will present HCS work
+
+- Community:
+    - Discussing installation workshop for Kobe in November
+
+## AOB
+
+(5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled)
+
+## Main Topic
+
+(20-25 minutes plus 15 minutes questions max)