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| tags: Tuesday | ||
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| # 2024-07-23 | ||
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| Attending: Frances, Dom, J-M, Seb, Josh, David, Tom, Kevin, Chris, Khaled, Andreas, Melissa, Kyle, Jason | ||
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| Start: 2:00 pm UK | ||
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| ## Accepting minutes from [last meeting](https://hackmd.io/team/ome?nav=overview) | ||
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| ## Project Status | ||
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| (2-3 minutes each) | ||
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| - IDR (Frances) | ||
| - working on next release, including BF fix from David, idr0043 (svs fix) | ||
| - planning to include microservice (under testing) | ||
| - targeting next week | ||
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| - OMERO | ||
| - omero-py (done), omero-web, openmicroscopy releases upcoming | ||
| - Andreas: OMERO.web: tests for tables API, if they pass then merging last couple of PRs for the next OMERO.web release (in next days) | ||
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| - Bio-Formats | ||
| - release of BF, all good | ||
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| - NGFF (Josh) | ||
| - Several DACH hackathons upcoming | ||
| - Nextflow in Tübingen in September | ||
| - SpatialData in Basel in November (limited space) | ||
| - OME-Zarr in Zürich in November | ||
| - "bioimaging interoperability" in Kassel in December | ||
| - Challenge | ||
| - dev2: [rust conversion](https://github.com/ome/ome2024-ngff-challenge/issues/7) (LDeakins) | ||
| - i.e., renewed interest in [zarr_implementations](https://github.com/zarr-developers/zarr_implementations/pull/57) (Josh) | ||
| - dev3: [REMBI metadata](https://github.com/ome/ome2024-ngff-challenge/pull/8) (Tom-TBT) | ||
| - IDR data for Challenge (Jason) | ||
| - Q: what data would IDR submit? All data is great, but depends on what's in scope, what can be used today, what's useful today? | ||
| - IDR can drive these questions. Would we contribute something for which there isn't a tool (today). Think so! Drive development/benchmarks. | ||
| - Need to figure out who is doing conversion. | ||
| - Rich datasets that may never be in a common spec. Try it out. | ||
| - FLIM: https://forum.image.sc/t/online-meeting-a-zarr-based-format-for-flim-raw-data/99244 | ||
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| - GerBI | ||
| - Josh: NFDI looking for metadata mapping use cases | ||
| - Josh: [FoundingGIDE](https://founding-gide.eurobioimaging.eu/) Update | ||
| - IDR metadata model definition, i.e., from [idr0000](https://github.com/IDR/idr0000-lastname-example/blob/master/idr0000-study_HCS.txt) | ||
| - multi-server search work (being defined). some PR cleanup first. | ||
| - [ontology landscape review](https://docs.google.com/document/d/1-36a6wtBLIq5CZlbNCmBTWToF2ODmbEFPfCswBq48Bs/edit?usp=sharing) | ||
| - hackathon in November in Japan. feel free to join :smile: | ||
| - Tom: opened a couple of PRs; nothing urgent (holidays) | ||
| - LUTs: https://github.com/search?q=org%3Aome+author%3Atom-tbt+LUTs&type=pullrequests | ||
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| - Glencoe | ||
| - preparation for SPI2 (beginning of September) | ||
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| - Community | ||
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| ## AOB | ||
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| (5 min. max; tech. Discussion should be highlighted to relevant people and rescheduled) | ||
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| ## Main Topic | ||
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| (20-25 minutes plus 15 minutes questions max) |