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Oklasoft

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  1. verhoeff verhoeff Public

    Pure-Ruby implementation of the Verhoeff checksum algorithm.

    Ruby 2

  2. b-tangs b-tangs Public

    Binning Trimmer of Artifacts in Next Gen Sequence - Clean out possible PCR artifacts by searching for like sequence reads via some map reduce

    Ruby 2

  3. ngs_scripts ngs_scripts Public

    Misc scripts for running some NGS analysis

    Ruby 2

  4. random_sam random_sam Public

    Quick one off to play with some MapReduce to get some random alignments from some SAMs

    Ruby 1

  5. scatter_plots_from_final_report scatter_plots_from_final_report Public

    Small script to wrap work of making basic XY plots of illumina final genotyping report

    Ruby 1

  6. BioTK BioTK Public

    Python toolkit for differential expression, text mining, and genomic interval analysis

    Python 1 1

Repositories

Showing 10 of 17 repositories
  • ngs_scripts Public

    Misc scripts for running some NGS analysis

    oklasoft/ngs_scripts’s past year of commit activity
    Ruby 2 0 0 0 Updated Apr 15, 2018
  • mmatcher Public

    Multiple Matcher - Matching Case/Controls

    oklasoft/mmatcher’s past year of commit activity
    Go 1 BSD-3-Clause 0 0 0 Updated Jan 16, 2018
  • print_ngs_label Public

    Quick Go app to print label for NGS lab

    oklasoft/print_ngs_label’s past year of commit activity
    Go 0 Apache-2.0 0 0 0 Updated Dec 27, 2016
  • vcftools Public Forked from vcftools/vcftools

    A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

    oklasoft/vcftools’s past year of commit activity
    C++ 0 150 0 0 Updated Jul 21, 2015
  • Multi-Matcher Public

    Simple Mac GUI wrapper for mmatcher

    oklasoft/Multi-Matcher’s past year of commit activity
    Swift 0 BSD-3-Clause 0 0 0 Updated Apr 13, 2015
  • homer-idr Public Forked from karmel/homer-idr

    Applying IDR analysis to Homer peaks.

    oklasoft/homer-idr’s past year of commit activity
    R 0 12 0 0 Updated Sep 5, 2014
  • bioruby-vcf Public Forked from vcflib/bio-vcf

    Smart VCF parser

    oklasoft/bioruby-vcf’s past year of commit activity
    Ruby 0 MIT 23 0 0 Updated Sep 1, 2014
  • b-tangs Public

    Binning Trimmer of Artifacts in Next Gen Sequence - Clean out possible PCR artifacts by searching for like sequence reads via some map reduce

    oklasoft/b-tangs’s past year of commit activity
    Ruby 2 0 0 0 Updated Apr 9, 2014
  • RepeatSoaker Public Forked from mdozmorov/RepeatSoaker

    a simple method to eliminate low-complexity short reads

    oklasoft/RepeatSoaker’s past year of commit activity
    Python 0 GPL-3.0 2 0 0 Updated Mar 28, 2014
  • BioTK Public

    Python toolkit for differential expression, text mining, and genomic interval analysis

    oklasoft/BioTK’s past year of commit activity
    Python 1 1 0 0 Updated Mar 20, 2014

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