Skip to content

Actions: nf-core/rnaseq

Fix linting from a comment

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
723 workflow runs
723 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1517: Issue comment #1554 (comment) created by dlabuz
May 29, 2025 15:06 1s
May 29, 2025 15:06 1s
.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1516: Issue comment #1554 (comment) created by alexhermida
May 29, 2025 07:00 2s
May 29, 2025 07:00 2s
--clip3pAdapterMMp has to contain 2 values to match the number of mates
Fix linting from a comment #1515: Issue comment #1544 (comment) created by SuhasSrinivasan
May 27, 2025 17:57 2s
May 27, 2025 17:57 2s
--clip3pAdapterSeq has to contain 2 values to match the number of mates
Fix linting from a comment #1514: Issue comment #1543 (comment) created by SuhasSrinivasan
May 27, 2025 17:50 2s
May 27, 2025 17:50 2s
Salmon index is not stored when using --save_reference
Fix linting from a comment #1513: Issue comment #1546 (comment) created by SuhasSrinivasan
May 27, 2025 17:50 3s
May 27, 2025 17:50 3s
nf-core rnaseq pipeline - determination of the correct strandedness for RNASeq libraries
Fix linting from a comment #1512: Issue comment #1539 (comment) created by pnatarajan9
May 27, 2025 16:51 2s
May 27, 2025 16:51 2s
Indexing only run does not produce all indexes when using skip_alignment option
Fix linting from a comment #1511: Issue comment #1494 (comment) created by pinin4fjords
May 27, 2025 16:15 2s
May 27, 2025 16:15 2s
Running test profile fails
Fix linting from a comment #1510: Issue comment #1510 (comment) created by pinin4fjords
May 27, 2025 14:23 2s
May 27, 2025 14:23 2s
rnaseq workflow isn't outputing .merged.gene_counts.tsv
Fix linting from a comment #1509: Issue comment #1505 (comment) created by pinin4fjords
May 27, 2025 14:22 3s
May 27, 2025 14:22 3s
May 27, 2025 14:01 2s
unable to override of custom.config
Fix linting from a comment #1507: Issue comment #1538 (comment) created by pinin4fjords
May 27, 2025 14:00 3s
May 27, 2025 14:00 3s
Salmon index is not stored when using --save_reference
Fix linting from a comment #1506: Issue comment #1546 (comment) created by pinin4fjords
May 27, 2025 13:38 2s
May 27, 2025 13:38 2s
nf-core rnaseq pipeline - determination of the correct strandedness for RNASeq libraries
Fix linting from a comment #1505: Issue comment #1539 (comment) created by pinin4fjords
May 27, 2025 13:30 3s
May 27, 2025 13:30 3s
--clip3pAdapterMMp has to contain 2 values to match the number of mates
Fix linting from a comment #1504: Issue comment #1544 (comment) created by pinin4fjords
May 27, 2025 13:29 2s
May 27, 2025 13:29 2s
It is unclear why RSEM index is created when using --save_reference
Fix linting from a comment #1503: Issue comment #1547 (comment) created by pinin4fjords
May 27, 2025 13:25 2s
May 27, 2025 13:25 2s
params.skip_alignment error when running nf-core/rnaseq 3.18.0 locally
Fix linting from a comment #1502: Issue comment #1552 (comment) created by pinin4fjords
May 27, 2025 13:07 2s
May 27, 2025 13:07 2s
No module named bioconda::fq
Fix linting from a comment #1501: Issue comment #1555 (comment) created by pinin4fjords
May 27, 2025 12:24 2s
May 27, 2025 12:24 2s
.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1500: Issue comment #1554 (comment) created by maxulysse
May 27, 2025 07:43 1s
May 27, 2025 07:43 1s
.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1499: Issue comment #1554 (comment) created by maxulysse
May 27, 2025 07:43 2s
May 27, 2025 07:43 2s
.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1498: Issue comment #1554 (comment) created by Rajdeep00003
May 27, 2025 04:42 2s
May 27, 2025 04:42 2s
.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1497: Issue comment #1554 (comment) created by gibcus
May 23, 2025 14:50 2s
May 23, 2025 14:50 2s
.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1496: Issue comment #1554 (comment) created by nttg8100
May 22, 2025 16:21 2s
May 22, 2025 16:21 2s
Unify SummarizedExperiment output
Fix linting from a comment #1495: Issue comment #1465 (comment) created by atrigila
May 22, 2025 14:55 2s
May 22, 2025 14:55 2s
.command.run permission denied in 3.16.1, 3.17.0, 3.18.0
Fix linting from a comment #1494: Issue comment #1554 (comment) created by MatthiasZepper
May 21, 2025 14:38 2s
May 21, 2025 14:38 2s
No module named bioconda::fq
Fix linting from a comment #1493: Issue comment #1555 (comment) created by bk1n
May 21, 2025 12:05 2s
May 21, 2025 12:05 2s