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Add RiboCode for detection of translated regions

enhancementNew feature or requestNew feature or request

Status: Open.

#132 In nf-core/riboseq;

· JackCurragh opened on Dec 16, 2025

Move Ribowaltz QC to <code>riboseq_qc</code> folder

enhancementNew feature or requestNew feature or request

Status: Open.

#130 In nf-core/riboseq;

· FelixKrueger opened on Dec 4, 2025

Updated Ribotricer to 1.4.0 to include --meta-min-reads

enhancementNew feature or requestNew feature or request

Status: Open.

#106 In nf-core/riboseq;

· rsam-git opened on May 20, 2025

sortMeRNA fails

bugSomething isn't workingSomething isn't working

Status: Open.

#81 In nf-core/riboseq;

· ulbivin opened on Jan 13, 2025

Remove warning when launching test profile

enhancementNew feature or requestNew feature or request

Status: Open.

#74 In nf-core/riboseq;

· maxulysse opened on Nov 4, 2024

Translational efficiency analysis doesn't work when there are two conditions with less than three replicates

bugSomething isn't workingSomething isn't working

Status: Open.

#66 In nf-core/riboseq;

· Xinlei-Gao opened on Aug 2, 2024

Optimise STAR command for riboseq data

enhancementNew feature or requestNew feature or request

Status: Open.

#30 In nf-core/riboseq;

· pinin4fjords opened on Feb 20, 2024

Generate contaminants file

enhancementNew feature or requestNew feature or request

Status: Open.

#28 In nf-core/riboseq;

· pinin4fjords opened on Feb 20, 2024

·  

v1.1.0

Add post-trimming fragment length check / reporting

enhancementNew feature or requestNew feature or request

Status: Open.

#25 In nf-core/riboseq;

· pinin4fjords opened on Feb 20, 2024

·  

v1.1.0

Incorporate check for 3nt periodicity

enhancementNew feature or requestNew feature or request

Status: Open.

#24 In nf-core/riboseq;

· pinin4fjords opened on Feb 19, 2024

·  

v1.1.0

Incorporate plastid metagene module

enhancementNew feature or requestNew feature or request

Status: Open.

#23 In nf-core/riboseq;

· pinin4fjords opened on Feb 19, 2024

Add plastid phase_by_size module

enhancementNew feature or requestNew feature or request

Status: Open.

#22 In nf-core/riboseq;

· pinin4fjords opened on Feb 19, 2024

·  

v1.1.0