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update nf-core/umitools/extract module - fixes #117 #118

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merged 23 commits into from
Mar 9, 2025

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slebedeva
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PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • Ensure the test suite passes (nextflow run . -profile test,docker).

This fixes #117 by updating the nf-core/umitools/extract module. The test suite passes with nextflow run . -profile test,singularity.

@slebedeva
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Also updated the correct path to the test samplesheet in conf/test.config.

@CharlotteAnne CharlotteAnne merged commit 343316d into nf-core:feat-2-0 Mar 9, 2025
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@CharlotteAnne
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excellent work @slebedeva !!!

@slebedeva slebedeva deleted the 117-update-umitools-extract branch March 14, 2025 09:31
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2 participants