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@naturalis

Naturalis Biodiversity Center

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  1. barcode-constrained-phylogeny Public

    Pipeline for building topologically-constrained phylogenies from DNA barcode data

    Python 2 3

Repositories

Showing 10 of 179 repositories
  • barcode-constrained-phylogeny-backbone Public
    Python 0 Apache-2.0 0 0 0 Updated Mar 8, 2025
  • barcode-constrained-phylogeny Public

    Pipeline for building topologically-constrained phylogenies from DNA barcode data

    Python 2 Apache-2.0 3 21 1 Updated Mar 7, 2025
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    Shell 0 MIT 3,410 0 0 Updated Mar 7, 2025
  • barcode_validator Public

    Standardized validation of barcodes

    Python 1 Apache-2.0 5 3 0 Updated Mar 6, 2025
  • sdmdl Public

    Species Distribution Modelling using Deep Learning

    Python 24 MIT 11 4 21 Updated Mar 5, 2025
  • barcode-phylogenetic-diversity Public

    Repository for experiments with QIIME-based alpha/beta PD metrics

    Python 0 Apache-2.0 0 3 0 Updated Feb 26, 2025
  • barcode-skimming-analysis Public

    Repository that analyses the success rates of genome skimming for the BGE project

    R 0 Apache-2.0 0 0 0 Updated Feb 25, 2025
  • edentity-metabarcoding-phylodiv Public

    Shell scripts for prototyping a QIIME2

    Python 0 Apache-2.0 0 0 0 Updated Feb 17, 2025
  • nba-brondata-bijzcol Public

    Bron data set for NBA on bijzondere collecties

    0 Apache-2.0 0 0 0 Updated Feb 15, 2025
  • barcode-classify-protax-fungi Public

    Profiling PROTAX-fungi for quick and coarse classification of ITS metabarcoding reads

    Python 0 Apache-2.0 0 0 0 Updated Jan 10, 2025
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