Plot.py - Non Functional

[AteeqMKhaliq]

Hello All,

i am trying to plot the graph for the output generated after running decomposition as usual and after finding the (1 s.d.) confidence intervals and a quasi-pvalue for each signature using Plot.py. i tried various ways but failed in generating the plot. May be the plot.py needs to be modified or I/O file should be tweeked !!! iam not very sure of it. I have modified the plot.py script as well but its not working for me .I am pasting plot.py (Modified version) for your reference.

I am using input.resamp.sig.txt as my input file for plotting --> let me know if this is correct or should i use some other file.
Let me know how best this can be solved.

Thanks !!!
Ateeq

`

import matplotlib.pyplot as plt
import sys
import numpy as np
import csv
from numpy import genfromtxt

def plot_signature(array, ylim=0.2, ax=None):
    color = ((0.196,0.714,0.863),)*16 + ((0.102,0.098,0.098),)*16 + ((0.816,0.180,0.192),)*16 + ((0.777,0.773,0.757),)*16 + ((0.604,0.777,0.408),)*16 + ((0.902,0.765,0.737),)*16
    color = list(color)
    
    width = max(array.shape)
    x = np.arange(width)
    if ax == None:
        f,ax = plt.subplots(1)
    bars = ax.bar(x, array)
    for h in range(len(x)):
        bars[h].set_color(color[h])
    plt.ylim(0, ylim)
    plt.xlim(0, width)
    plt.plot('/home/ateeqanees/Mutation/centos/input/plot.jpg')
    plt.show()

plot_signature(wines)
`