Remove all references to mbuild loaders so tests begin to work #2155
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- "main" | |
pull_request: | |
branches: | |
- "main" | |
schedule: | |
- cron: "0 0 * * *" | |
jobs: | |
test: | |
if: github.event.pull_request.draft == false | |
name: GMSO Tests (python) | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ubuntu-latest] | |
python-version: ["3.9", "3.10", "3.11", "3.12"] | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
name: Checkout Branch / Pull Request | |
- name: Install Mamba | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: environment-dev.yml | |
create-args: >- | |
python=${{ matrix.python-version }} | |
- name: Install Package | |
run: python -m pip install -e . | |
- name: Test (OS -> ${{ matrix.os }} / Python -> ${{ matrix.python-version }}) | |
run: python -m pytest -v --cov=gmso --cov-report=xml --cov-append --cov-config=setup.cfg --color yes --pyargs gmso | |
- name: Upload Coverage Report | |
uses: codecov/codecov-action@v4 | |
with: | |
name: GMSO-Coverage | |
verbose: true | |
arch-test: | |
if: github.event.pull_request.draft == false | |
name: GMSO Tests (arch) | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [macOS-latest, macOS-13, ubuntu-latest] | |
python-version: ["3.12"] | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
name: Checkout Branch / Pull Request | |
- name: Install Mamba | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: environment-dev.yml | |
create-args: >- | |
python=${{ matrix.python-version }} | |
- name: Install Package | |
run: python -m pip install -e . | |
- name: Test (OS -> ${{ matrix.os }} / Python -> ${{ matrix.python-version }}) | |
run: python -m pytest -v --color yes --pyargs gmso | |
bleeding-edge-test: | |
if: github.event.pull_request.draft == false | |
name: Bleeding Edge mosdef Tests for GMSO | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
name: Checkout Branch / Pull Request | |
- name: Install Mamba | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: environment-dev.yml | |
create-args: python=3.12 | |
- name: Clone mBuild and Foyer and forcefield-utilities | |
run: | | |
git clone https://github.com/mosdef-hub/mbuild.git | |
git clone https://github.com/mosdef-hub/foyer.git | |
git clone https://github.com/mosdef-hub/forcefield-utilities.git | |
- name: Update Environment with mbuild/foyer/ffutils Dependencies | |
run: | | |
micromamba update --name gmso-dev --file mbuild/environment.yml | |
micromamba update --name gmso-dev --file foyer/environment.yml | |
micromamba update --name gmso-dev --file forcefield-utilities/environment-dev.yml | |
- name: Install Packages from Source | |
run: | | |
pip install -e mbuild | |
pip install -e foyer | |
pip install -e forcefield-utilities | |
pip install -e . | |
- name: Run Bleeding Edge Tests | |
run: | | |
python -m pytest -v --color yes --pyargs gmso | |
docker: | |
runs-on: ubuntu-latest | |
needs: test | |
name: Build Docker Image | |
if: github.event_name != 'pull_request' | |
steps: | |
- name: Set up Docker Buildx | |
uses: docker/setup-buildx-action@v3 | |
- name: Login to DockerHub | |
uses: docker/login-action@v3 | |
with: | |
username: ${{ secrets.DOCKERHUB_USERNAME }} | |
password: ${{ secrets.DOCKERHUB_PASSWORD }} | |
- name: Get Tagged Version | |
run: | | |
echo "DOCKER_TAGS=mosdef/gmso:${GITHUB_REF_NAME}, mosdef/gmso:stable" >> $GITHUB_ENV | |
if: github.ref_type == 'tag' | |
- name: Get Push Version | |
run: | | |
echo "DOCKER_TAGS=mosdef/gmso:${GITHUB_REF_NAME}, mosdef/gmso:latest" >> $GITHUB_ENV | |
if: github.ref_type == 'branch' | |
- name: Docker Image Info | |
run: | | |
echo Docker Image tags: ${DOCKER_TAGS} | |
- name: Build and Push | |
uses: docker/build-push-action@v6 | |
with: | |
push: true | |
tags: ${{ env.DOCKER_TAGS }} |