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Perform dimensional reduction and clustering on mass cytometry data and visualize using Plotly Dash
- Free software: GNU Lesser General Public License v3 or later (LGPLv3+)
pip install mass-cytometry-reduction
You can also install the in-development version with:
pip install https://github.com/milescsmith/mass_cytometry_reduction/archive/master.zip
https://mass_cytometry_reduction.readthedocs.io/
To run all the tests run:
tox
Note, to combine the coverage data from all the tox environments run:
| Windows | set PYTEST_ADDOPTS=--cov-append tox |
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| Other | PYTEST_ADDOPTS=--cov-append tox |