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metagenome-atlas

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atlas atlas Public

ATLAS - Three commands to start analyzing your metagenome data

Python 395 99
Tutorial Tutorial Public

A tutorial for Metagenome-Atlas

MAXScript 23 11

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Showing 10 of 31 repositories

metagenome_instrain Public

metagenome-atlas/metagenome_instrain’s past year of commit activity

Python 0 MIT 0 0 0 Updated May 14, 2025
atlas Public
ATLAS - Three commands to start analyzing your metagenome data

metagenome-atlas/atlas’s past year of commit activity

Python 395 BSD-3-Clause 99 3 8 Updated May 9, 2025
metagenome-assembly Public
Workflow module for metagenome assembly

metagenome-atlas/metagenome-assembly’s past year of commit activity

Python 2 MIT 0 0 0 Updated Jun 25, 2024
snakemake-wrappers Public Forked from snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see

metagenome-atlas/snakemake-wrappers’s past year of commit activity

CAP CDS 0 197 0 1 Updated Jan 15, 2024
Tutorial Public
A tutorial for Metagenome-Atlas

metagenome-atlas/Tutorial’s past year of commit activity

MAXScript 23 GPL-3.0 11 4 2 Updated Nov 24, 2023
genecatalog_atlas Public
Extended genecatalog workflow for metagenome-atlas

metagenome-atlas/genecatalog_atlas’s past year of commit activity

Python 1 MIT 0 0 0 Updated Sep 27, 2023
genome-annotator Public

metagenome-atlas/genome-annotator’s past year of commit activity

Python 3 MIT 0 1 0 Updated Sep 27, 2023
supp_data_atlas Public
Supplementary data for Atlas manuscript

metagenome-atlas/supp_data_atlas’s past year of commit activity

Jupyter Notebook 1 1 0 0 Updated Sep 27, 2023
plasmid_atlas Public

metagenome-atlas/plasmid_atlas’s past year of commit activity

Python 1 MIT 0 0 0 Updated Sep 27, 2023
kingfisher_workflow Public Forked from trickovicmatija/kingfisher_workflow
This is a workflow that allows you to download whole projects and metadata with kingfisher. Additionally, it takes care about merging same samples together.

metagenome-atlas/kingfisher_workflow’s past year of commit activity

Python 0 MIT 1 0 0 Updated Aug 31, 2023

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