Fix docs deployment (#20) #88
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| # This is a basic workflow to help you get started with Actions | |
| name: Build and deploy website | |
| # Controls when the workflow will run | |
| on: | |
| # Triggers the workflow on push events but only for the "main" branch | |
| push: | |
| branches: [ "main" ] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build-and-deploy" | |
| build-and-deploy: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| - name: Clone acquire-docs repo | |
| uses: actions/checkout@v4 | |
| with: | |
| path: acquire-docs # place in a named directory | |
| - uses: actions/setup-python@v4 | |
| with: | |
| python-version: '3.10' | |
| - run: pip install -r acquire-docs/requirements.txt | |
| - name: Generate downloadable scripts | |
| run: | | |
| cd acquire-docs | |
| bash .github/workflows/convert.sh | |
| - name: Clone acquire-python repo | |
| uses: actions/checkout@v4 | |
| with: | |
| path: acquire-python # place in a named directory | |
| repository: acquire-project/acquire-python | |
| submodules: true | |
| - name: Install acquire-python # For collecting the API reference | |
| run: | | |
| cd acquire-python | |
| python -m pip install -e . | |
| - name: Clone acquire-zarr repo | |
| uses: actions/checkout@v4 | |
| with: | |
| path: acquire-zarr # place in a named directory | |
| repository: acquire-project/acquire-zarr | |
| - name: Install Doxygen | |
| run: sudo apt-get install -y doxygen | |
| - name: Install vcpkg | |
| run: | | |
| git clone https://github.com/microsoft/vcpkg.git | |
| cd vcpkg && ./bootstrap-vcpkg.sh | |
| echo "VCPKG_ROOT=${{github.workspace}}/vcpkg" >> $GITHUB_ENV | |
| echo "${{github.workspace}}/vcpkg" >> $GITHUB_PATH | |
| ./vcpkg integrate install | |
| shell: bash | |
| - name: Install acquire-zarr # For collecting the API reference | |
| run: | | |
| cd acquire-zarr | |
| python -m pip install pybind11 | |
| cmake --preset=default -B build -DBUILD_PYTHON=ON . | |
| cmake --build build | |
| python -m pip install . | |
| - name: Run Doxygen | |
| run: | | |
| cd acquire-docs | |
| doxygen docs/api_reference/Doxyfile | |
| shell: bash | |
| - name: Build website | |
| run: | | |
| cd acquire-docs | |
| mkdocs build | |
| - name: Replace relative links in Doxygen include | |
| run: | | |
| mv acquire-docs/site/acquire_zarr_c_api acquire-docs/site/api_reference/c_api | |
| sed -i 's@acquire_zarr_c_api/acquire_zarr_c_api#@#@g' acquire-docs/site/api_reference/c_api/index.html | |
| sed -i 's@\.md@\.html@g' acquire-docs/site/api_reference/c_api/index.html | |
| sed -i '/<ul>/{N;N;/<ul>\n<li><code>#include \"zarr.types.h\"/d;}' acquire-docs/site/api_reference/c_api/index.html | |
| sed -i '/<ul>/{N;N;N;N;/<ul>\n<li><code>#include/d;}' acquire-docs/site/api_reference/c_api/index.html | |
| - name: Deploy docs | |
| uses: peaceiris/actions-gh-pages@v3 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| # external_repository: acquire/acquire-docs.github.io | |
| publish_dir: acquire-docs/site | |
| publish_branch: gh-pages | |
| destination_dir: dev | |
| # cname: acquire.org |