v2.2.2

2.2.2 (2025-09-09)

Reverts

• ci: rollback release workflow for building binaries (1dc12d1)

v2.2.1

2.2.1 (2025-09-09)

Reverts

• deps: rollback rust-htslib to 0.46.0 (81023d6)

v2.2.0

2.2.0 (2025-09-05)

Features

• add --strict to error if target coverage is not possible (b69142f), closes #81

v2.1.1

2.1.1 (2025-07-25)

Bug Fixes

• improper shuffling of records with same position in aln subcommand (d0264ae), closes #76

v2.1.0

2.1.0 (2024-08-19)

Features

• [aln] add program (@PG) entry to header (0123e54)
• log seed used when --seed not passed (6e1f37d)

v2.0.0

2.0.0 (2024-05-03)

⚠ BREAKING CHANGES

• paired reads require --output once for each file

Bug Fixes

• paired reads require --output once for each file (1427a0b)

v1.0.0

1.0.0 (2024-04-29)

⚠ BREAKING CHANGES

• move fastq functionality to reads subcommand

Features

• add cite command to get citation (db17612)
• add subcommand aln to subsample alignments (b92979a)
• move fastq functionality to reads subcommand (f48d47b)

Bug Fixes

• deal with chromosomes with no alignments (14aa15e)

v0.8.0

0.8.0 (2024-01-03)

Features

• add logging message with coverage of input before downsampling (79445fc)
• support ztsd (cfa50f8)
• use default compression level for compression output type (cfa50f8)

Bug Fixes

• update logging so colour not sent to file (bc62c3f)

0.7.1

Added

• Install script and support for more binary triple targets

Changed

• Updated needletail dependecy due to dependency deprecation

0.7.0

Added

• Fraction (--frac) and number (--num) options. This allows users to replicate the
  functionality of seqtk sample [#34]