v0.2.0

0.2.0 (2025-10-27)

Features

• Added a function to detect the sequencing type (decision maker for subsequent sequencing type check. (132ce0c)
• aviti integration and SAMBA structure update (#114) (132ce0c)
• Implemented Aviti flowcell ID recognition and Parkour communication for downstream analysis. (132ce0c)
• Introduced new SAMBA structure for improving data management. (132ce0c)

Bug Fixes

• Added --snakemakePath option to enable the 10X_snakePipe workflow. (132ce0c)
• Updated adapters for the RELACS pipeline. (132ce0c)

v0.1.0

0.1.0 (2025-10-06)

Features

• release please (#112) (21887fe)

Bug Fixes

• drop reuse of quote character in f-strings for overall python compatibility (21887fe)

v0.0.15

• fixes #106

0.0.14

Merge pull request #107 from gerikson/main

NEBNext Single Cell  and Relacs sample sheet path

v0.0.10

• log verbosity on unknown / unsupported protocols
• makePairs mode implementation for uC libtypes

v0.0.9

snakePipes 3.0.0

v0.0.8

• wrong samba path creation fixed in RELACS copying
• SMART-seq is retired for Smart-seq
• log the actual commands executed

v0.0.7

What's Changed

• Omit RELACS demux if appropriate number of PNG is present, hardcode order of RELACS demux plotter according to plate coordinates, if present in sampleSheet
• Permissions set to 700 by default
• fix DNA return on ATAC runs
• add latest scATAC libtype

v0.0.6

• RELACS barcodes include name in the barcode plot
• bioinfocoredir updated for mqc reports

v0.0.5

• RELACS properly relink fastq files
• email updated with retry headers
• group permissions purged