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1. mehta-lab/recOrder mehta-lab/recOrder Public

   3D quantitative label-free imaging with phase and polarization

   Python 16 4

2. mehta-lab/waveorder mehta-lab/waveorder Public

   Wave optical models and inverse algorithms for label-agnostic imaging of density & orientation.

   Python 22 4

3. czbiohub-sf/iohub czbiohub-sf/iohub Public

   Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata

   Python 34 8

4. mehta-lab/VisCy mehta-lab/VisCy Public

   computer vision models for single-cell phenotyping

   Python 44 4

5. czbiohub-sf/shrimPy czbiohub-sf/shrimPy Public

   shrimPy: Smart High-throughput Robust Imaging & Measurement in Python

   Python 9 3