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Pipeline-Standardization
Pipeline-Standardization PublicForked from CCDG/Pipeline-Standardization
Python
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EasyMicrobiome
EasyMicrobiome PublicForked from WatsonWoo/db
Scripts and databases for amplicon and metagenome
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gatk4-exome-analysis-pipeline
gatk4-exome-analysis-pipeline PublicForked from gatk-workflows/gatk4-exome-analysis-pipeline
This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and Indel discovery in human exome sequencing data.
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gatk4-somatic-snvs-indels
gatk4-somatic-snvs-indels PublicForked from gatk-workflows/gatk4-somatic-snvs-indels
This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are also organized in Dockstore in the GATK Best Practices Workflo…
WDL
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