Mac Development Ansible Playbook

Playbook for configuring Johns Hopkins CMDB laptops, based on https://github.com/i11/mac-dev-playbook

Mac Applications installed

(The following are installed using homebrew cask)

• Dropbox
• Firefox
• Java
• Sublime Text
• TextMate
• Text Wrangler
• MacTeX
• RStudio
• Atom
• Google Chrome

Applications installed from Homebrew

• git
• wget
• numpy
• scipy
• matplotlib

From homebrew/science

• blast
• samtools
• bamtools
• bedtools
• bedops
• bcftools
• vcftools
• htslib
• bwa
• bowtie
• bowtie2
• tophat
• cufflinks
• mummer
• clustal-w
• clustal-omega
• fasta
• fastqc
• hmmer
• igv
• igvtools
• meme
• quast
• lastz
• abyss
• igraph
• picard-tools
• trinity
• velvet
• ray
• augustus
• spades
• soapdenovo
• cegma
• glimmerhmm
• gmap-gsnap
• blasr
• kraken
• plink
• quake
• snpeff
• hotspot
• sratoolkit

From homebrew/python

• numpy
• scipy
• matplotlib
• pillow

Installed using Python's pip

• patsy
• statsmodels
• cython
• ipython
• sympy
• pandas
• pymc
• simpy
• scikit-image
• scikit-learn
• PyX
• macs2