The codes presented here are developed for EELS tomography data processing; the tilt axis alignment, feature map tilt series production and tomographic reconstruction can be achieved.
pip install CAETomo
# Generally required
numpy
matplotlib
tifffile
# Tilt axis alignment
opencv
ipywidgets
scikit-image
# Feature extraction and reconstruction
drca # automatically installed with CAETomo
pytorch
tabulate
torchkbnufft
@article{jo2024eelstomo,
author = {Jo, J., Ryu, J., Huh, J.-H., Kim, H., Seo, D. H., Lee, J., Kwon, M., Lee, S., Nam, K. T., Kim M.},
title = {Direct three-dimensional observation of the plasmonic near-fields of a nanoparticle with circular dichroism},
journal = {ACS Nano},
volume = {18},
Issue = {47},
pages = {32769–32780},
year = {2024},
doi = {https://doi.org/10.1021/acsnano.4c10677}
}
Jinseok Ryu, Ph.D. ([email protected])