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  1. PEAT PEAT Public

    An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.

    C++ 22 7

  2. EARRINGS EARRINGS Public

    EARRINGS: An efficient and ingenious adapter removal design for large-scale NGS meta-analyses

    C++ 9 2

  3. Tailor Tailor Public

    Tailor is a fast short read aligner like bowtie/BWA/SOAP2 but is designed specifically to discovering trimming and tailing events for small silencing RNAs.

    C++ 7 6

  4. sBWT sBWT Public

    A highly hardware-acceleration friendly k-ordered FM-index for exact string matching, overlap graph construction for de novo assembly, and more.

    C++ 7 1

  5. EpiVerse EpiVerse Public

    EpiVerse is an innovative three-stage pipeline designed to impute chromatin structures across various cell types. By enabling cross cell-type Hi-C imputations, EpiVerse facilitates unique "epigenom…

    Python 4

  6. PS2MS PS2MS Public

    PS²MS is an AI-driven predictive system designed to identify new psychoactive substances (NPS) using mass spectrometry. It generates a synthetic NPS database by enumerating feasible derivatives of …

    C++ 3 1