-
Notifications
You must be signed in to change notification settings - Fork 1
Open
Description
When generating a dataset we add s0 to support mutiscale but we are missing metadata
cellmap-flow/cellmap_flow/blockwise/blockwise_processor.py
Lines 123 to 132 in adbd54f
array = prepare_ds( | |
DirectoryStore(self.output_path / channel / "s0"), | |
output_shape, | |
dtype=self.dtype, | |
chunk_shape=self.block_shape, | |
voxel_size=self.output_voxel_size, | |
axis_names=["z", "y", "x"], | |
units=["nm", "nm", "nm"], | |
offset=(0, 0, 0), | |
) |
Can get inspired by
https://github.com/janelia-cellmap/cellmap-analyze/blob/a84d249f9689c74d8d509de359c878d85b6704ba/src/cellmap_analyze/util/zarr_util.py#L43-L70
Metadata
Metadata
Assignees
Labels
No labels