healthgps-plots

A set of scripts for plotting and visualising data related to Health-GPS

Getting Started

Prerequisites

• R installed
• renv installed

Cloning the Repository

git clone https://github.com/imperialCHEPI/healthgps-plots.git
cd healthgps-plots

Setting Up the Project Environment with renv

1. Activate the renv environment:

Rscript -e 'renv::activate()'

2. Install project dependencies:

Rscript -e 'renv::restore()'

Running the Script

You can now run the visualisation script using:

Rscript Visualisation.R path/to/HealthGPS_Result_S1.csv path/to/HealthGPS_Result_S2.csv path/to/HealthGPS_Result_S4.csv path/to/HealthGPS_Result_S5.csv

Updating Dependencies

If you make changes to the project dependencies or want to ensure you have the latest versions, you can update the renv.lock file:

Rscript -e 'renv::snapshot()'

Deactivating the renv Environment

After you are done using the project, you can deactivate the renv environment:

Rscript -e 'renv::deactivate()'