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plugins.json
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plugins.json
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{
"plugins": [
{
"name": "3Dscript",
"description": "Create high-quality 3D/4D animations using a natural-language based syntax.",
"link": "/plugins/3d-script",
"imgUrl": "/media/3dscript-wiki-01.jpg"
},
{
"name": "Action Bar",
"description": "Extend ImageJ's graphical user interface, providing one (or many) easy to use button bar(s).",
"link": "/plugins/action-bar",
"imgUrl": "/media/plugins/action-bar/actionbar.jpeg"
},
{
"name": "BAR",
"description": "<b>B</b>roadly <b>A</b>pplicable <b>R</b>outines, containing macros, scripts, and plugins focused on data analysis, image annotation, and image segmentation.",
"link": "/plugins/bar",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/9/2/92d573b5fd4cd4f66479bbb1e81ce1cd819e698f.png"
},
{
"name": "BigDataViewer",
"description": "Re-slicing browser for terabyte-sized multi-view image sequences developed with multi-view light-sheet microscopy data in mind.",
"link": "/plugins/bdv",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/optimized/3X/3/d/3d17bec39571a7cb1f1e47dea97945c02ee76757_2_812x1000.jpeg"
},
{
"name": "Bio-Formats",
"description": "An open source solution for converting proprietary microscopy image data and metadata into standardized, open formats.",
"link": "/formats/bio-formats",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/d/a/dadff54a01c93c4c08bfeb7fee063bf2adb6750e.png"
},
{
"name": "BigStitcher",
"description": "Simple and efficient alignment of multi-tile and multi-angle image datasets.",
"link": "/plugins/bigstitcher",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/c/b/cb7a76cf296744b144ad3cf104e7b57e516e2866.jpeg"
},
{
"name": "BioVoxxel Toolbox",
"description": "Image filters, lighting correction, threshold tests and binary image modification algorithms and variable 2D object analysis tools.",
"link": "/plugins/biovoxxel-toolbox",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/optimized/3X/8/1/81b5adb2178dbce5eed11738c40a95cf1f472737_2_1380x974.png"
},
{
"name": "BoneJ",
"description": "Bone image analysis, including tools for trabecular geometry and whole bone shape analysis.",
"link": "/plugins/bonej",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/7/4/7497f8240d77ad118548f1d266b28da1bc0367a4.jpeg"
},
{
"name": "CLIJ",
"description": "GPU-accelerated image processing offering about 100 predefined OpenCL-based functions allowing you to run your workflows on any GPU.",
"link": "/plugins/clij",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/2/d/2d99847e7dcac1c799b36e744fa23440aeb0f69d.png"
},
{
"name": "Coloc 2",
"description": "Pixel intensity correlation over space methods of Pearson, Manders, Costes, Li and more, for scatterplots, analysis, automatic thresholding and statistical significance testing.",
"link": "/plugins/coloc-2",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/optimized/3X/1/e/1ed1f18af8a9f37bb284fd9d147969ba1cf7411d_2_1202x1000.jpeg"
},
{
"name": "FigureJ",
"description": "Easy article figures with links to original images and processing history",
"link": "/plugins/figurej",
"imgUrl": "/media/figurej-poster.png"
},
{
"name": "MaMuT",
"description": "Combines TrackMate and BigDataViewer for browsing, annotating, and curating annotations for large image data.",
"link": "/plugins/mamut",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/2/2/229085d893a3f9da7122f23fa9a68cf20be00327.png"
},
{
"name": "Microscope Image Focus Quality Classifier",
"description": "Predict image focus quality and certainty patch by patch without any user-specified parameters.",
"link": "/plugins/microscope-focus-quality",
"imgUrl": "/media/mifqc.png"
},
{
"name": "MorphoLibJ",
"description": "Morphological filtering and reconstruction, watershed segmentation, 2D/3D measurements, and binary/label images utilities.",
"link": "/plugins/morpholibj",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/5/6/56b924bc527c4b18245f501e8f9c584360c4756e.png"
},
{
"name": "Multi-Template Matching",
"description": "Object recognition using user-provided template(s)",
"link": "/plugins/multi-template-matching",
"imgUrl": "/media/multi-template-matching-montagegui.png"
},
{
"name": "sciview",
"description": "3D visualization and virtual reality capabilities for images and meshes.",
"link": "/plugins/sciview",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/e/7/e7528ec56533bf7df7e6ee3a23e284dcd4056af3.gif"
},
{
"name": "Script Editor",
"description": "Develop scripts dynamically within ImageJ: multiple languages, syntax highlighting, language-specific templates, and more.",
"link": "/scripting/script-editor",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/optimized/3X/6/c/6c63f2cf33ded347764c6104853e87a28b3c22d4_2_1380x692.png"
},
{
"name": "SNT",
"description": "The ImageJ framework for neuronal reconstructions.",
"link": "/plugins/snt",
"imgUrl": "/media/simpleneuritetracer2.png"
},
{
"name": "TrackMate",
"description": "An open and extensible platform for single-particle tracking.",
"link": "/plugins/trackmate",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/7/c/7c1ea197732c2374c1d5b5cf9db36af6f55a7e01.jpeg"
},
{
"name": "Trainable Weka Segmentation",
"description": "A collection of machine learning algorithms with a set of selected image features to produce pixel-based segmentations.",
"link": "/plugins/tws",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/4/f/4ff2d71b69f24c693184a6983b91322d369f81ba.png"
},
{
"name": "TrakEM2",
"description": "Morphological data mining, three-dimensional modeling, image stitching, registration, editing, and annotation.",
"link": "/plugins/trakem2",
"imgUrl": "https://aws1.discourse-cdn.com/business4/uploads/imagej/original/3X/7/9/797795554da67c9c95ce8f37dced86187215144d.jpeg"
}
]
}