Update_htool #58
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| # This is a basic workflow to help you get started with Actions | |
| name: CI | |
| # Controls when the action will run. | |
| on: | |
| # Triggers the workflow on push or pull request events but only for the master branch | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| # # Run tests every month | |
| # schedule: | |
| # - cron: '0 0 1 * *' | |
| # A workflow run is made up of one or more jobs that can run sequentially or in parallel | |
| jobs: | |
| # This workflow contains a single job called "build" | |
| linux: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| include: | |
| - name: "Ubuntu OpenMPI g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "ubuntu_gcc_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Ubuntu OpenMPI clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "ubuntu_clang_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Ubuntu MPICH g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "ubuntu_gcc_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Debug | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "ON" | |
| - name: "Ubuntu MPICH clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "ubuntu_clang_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| # Hangs on github | |
| - name: "Debian OpenMPI g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "debian_gcc_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Debian OpenMPI clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "debian_clang_openmpi" | |
| MPIEXEC_PREFLAGS: "--allow-run-as-root --oversubscribe" | |
| USE_SANITIZER: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: "--cap-add SYS_PTRACE" | |
| CODE_COVERAGE: "OFF" | |
| - name: "Debian MPICH g++" | |
| CC_COMPILER: gcc | |
| CXX_COMPILER: g++ | |
| container: "debian_gcc_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| - name: "Debian MPICH clang++" | |
| CC_COMPILER: clang | |
| CXX_COMPILER: clang++ | |
| container: "debian_clang_mpich" | |
| MPIEXEC_PREFLAGS: "" | |
| CMAKE_BUILD_TYPE: Release | |
| DOCKER_OPTIONS: " " | |
| CODE_COVERAGE: "OFF" | |
| container: | |
| image: pierremarchand/htool_testing_environments:${{ matrix.container }} | |
| options: --user root ${{ matrix.DOCKER_OPTIONS }} | |
| name: CI (${{ matrix.name }}) | |
| env: | |
| CC: ${{ matrix.CC_COMPILER }} | |
| CXX: ${{ matrix.CXX_COMPILER }} | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| if: "!contains(github.event.head_commit.message, '[ci skip]')" | |
| steps: | |
| - name: Checkout htool-python | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: "true" | |
| - name: Build package in release | |
| if: matrix.CODE_COVERAGE == 'OFF' | |
| run: | | |
| pip3 install .[test] --user --verbose | |
| - name: Build package in debug for coverage | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| run: | | |
| mkdir build && cd build | |
| pip3 install numpy matplotlib pytest mpi4py | |
| CC=${{ matrix.CC_COMPILER }} CXX=${{ matrix.CXX_COMPILER }} cmake -DUSE_SANITIZER=${{ matrix.USE_SANITIZER }} -DCMAKE_BUILD_TYPE=${{ matrix.CMAKE_BUILD_TYPE }} -DCODE_COVERAGE=${{ matrix.CODE_COVERAGE }} ../ | |
| make | |
| - name: Run tests | |
| run: | | |
| export PYTHONPATH="$PWD/build" | |
| mpirun -np 1 ${{ matrix.MPIEXEC_PREFLAGS }} pytest tests | |
| mpirun -np 2 ${{ matrix.MPIEXEC_PREFLAGS }} pytest tests | |
| mpirun -np 3 ${{ matrix.MPIEXEC_PREFLAGS }} pytest tests | |
| mpirun -np 4 ${{ matrix.MPIEXEC_PREFLAGS }} pytest tests | |
| - name: Check format | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| # https://github.com/actions/checkout/pull/762 | |
| run: | | |
| git config --global --add safe.directory `pwd` | |
| cd build | |
| make format | |
| make cmake-format | |
| git diff --exit-code | |
| - name: Check module imports with isort | |
| run: | | |
| python3 -m pip install isort | |
| python3 -m isort . --check-only --diff | |
| - name: Check formatting with black | |
| uses: psf/black@stable | |
| - name: Generate coverage reports | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| run: | | |
| lcov --capture --base-directory ./ --directory build/ --output-file coverage.info | |
| lcov --remove coverage.info '/usr/*' '*/hpddm/*' '*/pybind11/*' '*/lib/htool/*' --output-file coverage.info | |
| - name: Upload coverage to Codecov | |
| if: matrix.CODE_COVERAGE == 'ON' | |
| uses: codecov/codecov-action@v2 | |
| with: | |
| file: coverage.info |