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Use uv workspaces and include higlass-schema package #152

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@manzt manzt commented Oct 18, 2024

This PR changes higlass-python to a uv workspace, allowing simultaneous development of higlass-schema and higlass-python. IMO these two projects should live together, and a monorepo makes it easy to iterate on both.

I was able to merge the histories of the two projects independently with git subtree.

TODO

  • figure out CI release strategy (idea: use scoped tags to trigger releases)

manzt and others added 30 commits February 2, 2022 17:00
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [actions/setup-node](https://github.com/actions/setup-node) from 3 to 4.
- [Release notes](https://github.com/actions/setup-node/releases)
- [Commits](actions/setup-node@v3...v4)

---
updated-dependencies:
- dependency-name: actions/setup-node
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4.
- [Release notes](https://github.com/actions/checkout/releases)
- [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md)
- [Commits](actions/checkout@v3...v4)

---
updated-dependencies:
- dependency-name: actions/checkout
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <[email protected]>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Move dev-deps to uv.tool

* Create uv lock file

* Remove hatch cli config and update developer README

* Update workflows

* Update outdated pyproject.toml fields
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