SEGNet

Automated Bone Segmenting and Rendering Application

Introduction

SEGNet is an open-source, multi-platform bone segmentation and Dicom viewer with user-friendly interface. SEGNet provides ease in viewing Dicom data; Mouse integrations will help you to visualize Dicom in a detailed way. SEGNet utilizes combined power of image processing and computer vision for fast segmentation of bone from a CT Dicom data.

Developments need to be done

• Fullscreen mode for widgets
• Advanced surface properties

Requirements

• VTK
• Pyqt5
• Opencv
• Numpy

Requirements can be dwonloaded as shown below:

git clone https://github.com/hanaisreal/MedSAM-Dicom.git

cd SEGNet

pip3 install -r requirement.txt (For Linux add sudo)

Running GUI

cd SEGNet

cd src

python3 Main.py

Tested on Windows and Linux

User Interface

Dicom Widget:

mouse_scroll - Change slice

clrt + left_mouse_button - Pan

clrt + mouse_scroll - Zoom

mouse_right_button + drag - Contrast/Brightness

r - Reset view

3D Renderer:

All basic mouse movements!

MIT License

You can use it absolutely anywhere!

Feel free to make a pull request if you feel that you have to improve this tool