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gpstuff-dev · Apr 11, 2014 · 54f94d4 · 54f94d4
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diff --git a/diag/acorr.m b/diag/acorr.m
@@ -8,9 +8,9 @@
 %
 %   See also
 %     XCORR
-
-% Copyright (C) 2000 Aki Vehtari
 %
+% Copyright (C) 2000 Aki Vehtari
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/acorr2.m b/diag/acorr2.m
@@ -4,7 +4,6 @@
 %   C = ACORR(X,MAXLAG) returns normalized autocorrelation
 %   sequences for each column of X computing correlation via FFT
 %
-
 % Copyright (C) 2000-2008 Aki Vehtari
 %
 % This software is distributed under the GNU General Public

diff --git a/diag/acorrtime.m b/diag/acorrtime.m
@@ -28,9 +28,9 @@
 %          for spatio-temporally misaligned data using DIC
 %          criterion. Technical report, Division of Biostatistics,
 %          University of Minnesota, 1999. p. 9.
-
-% Copyright (C) 2000-2001 Aki Vehtari
 %
+% Copyright (C) 2000-2001 Aki Vehtari
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/aucs.m b/diag/aucs.m
@@ -15,7 +15,7 @@
 %    methods to assess improvement in risk prediction models:
 %    Extension to survival analysis. Statistics in Medicine
 %    30(1):22-38.
-
+%
 % Copyright (C) 2012 Ernesto Ulloa, Aki Vehtari
 
 % This software is distributed under the GNU General Public

diff --git a/diag/auct.m b/diag/auct.m
@@ -13,7 +13,7 @@
 %    methods to assess improvement in risk prediction models:
 %    Extension to survival analysis. Statistics in Medicine
 %    30(1):22-38.
-
+%
 % Copyright (C) 2012 Ernesto Ulloa, Aki Vehtari
 
 % This software is distributed under the GNU General Public

diff --git a/diag/cipsrf.m b/diag/cipsrf.m
@@ -12,10 +12,10 @@
 %
 %   See also
 %     IPSRF
-
+%
 % Copyright (C) 1999 Simo Särkkä
 % Copyright (C) 2004 Aki Vehtari
-%
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/cmpsrf.m b/diag/cmpsrf.m
@@ -12,9 +12,9 @@
 %
 %   See also
 %     MPSRF, PSRF, CPSRF
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/cpsrf.m b/diag/cpsrf.m
@@ -12,10 +12,10 @@
 %
 %   See also
 %     PSRF, MPSRF, CMPSRF
-
+%
 % Copyright (C) 1999 Simo Särkkä
 % Copyright (C) 2013 Aki Vehtari
-%
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/custats.m b/diag/custats.m
@@ -4,9 +4,9 @@
 %   [CA,CS] = custats(X) or [CA,CS] = custats(X,n0)
 %   returns cumulative statistics of X. CA is the
 %   cumulative average and CS is the cumulative variance.
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/cusum.m b/diag/cusum.m
@@ -21,9 +21,9 @@
 %
 %   See also
 %     HAIR
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/derivativecheck.m b/diag/derivativecheck.m
@@ -20,7 +20,6 @@
 %    DELTA=DERIVATIVECHECK(X, FUN) returns the delta between the
 %    user-supllied and finite difference derivatives.
 %
-
 % Copyright (c) Christopher M Bishop, Ian T Nabney (1996, 1997)
 % Copyright (c) 2010-2011 Aki Vehtari
 

diff --git a/diag/ext_auc.m b/diag/ext_auc.m
@@ -13,7 +13,6 @@
 %    Extension to survival analysis. Statistics in Medicine
 %    30(1):22-38.
 %
-
 % Copyright (C) 2012 Ernesto Ulloa, Aki Vehtari
 
 % This software is distributed under the GNU General Public

diff --git a/diag/gbinit.m b/diag/gbinit.m
@@ -18,9 +18,9 @@
 %
 %   See also
 %     GBITER
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/gbiter.m b/diag/gbiter.m
@@ -31,9 +31,9 @@
 %
 %  See also
 %    GBINIT
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/geyer_icse.m b/diag/geyer_icse.m
@@ -9,9 +9,9 @@
 %   References:
 %      [1] C. J. Geyer, (1992). "Practical Markov Chain Monte Carlo",
 %          Statistical Science, 7(4):473-511
-
-% Copyright (C) 2002 Aki Vehtari
 %
+% Copyright (C) 2002 Aki Vehtari
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/geyer_imse.m b/diag/geyer_imse.m
@@ -15,9 +15,9 @@
 %
 %       See also
 %       GEYER_ICSE
-
-% Copyright (C) 2002-2003 Aki Vehtari
 %
+% Copyright (C) 2002-2003 Aki Vehtari
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/hair.m b/diag/hair.m
@@ -25,9 +25,9 @@
 %
 %   See also
 %     CUSUM
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/hcs.m b/diag/hcs.m
@@ -22,7 +22,7 @@
 %    methods to assess improvement in risk prediction models:
 %    Extension to survival analysis. Statistics in Medicine
 %    30(1):22-38.
-
+%
 % Copyright (C) 2012 Tomi Peltola, Ernesto Ulloa, Aki Vehtari
 
 % This software is distributed under the GNU General Public

diff --git a/diag/hct.m b/diag/hct.m
@@ -13,7 +13,6 @@
 %    Extension to survival analysis. Statistics in Medicine
 %    30(1):22-38.
 %
-
 % Copyright (C) 2012 Ernesto Ulloa, Aki Vehtari
 
 % This software is distributed under the GNU General Public

diff --git a/diag/hpdi.m b/diag/hpdi.m
@@ -8,9 +8,9 @@
 %   References:
 %      [1] Chen, M.-H., Shao, Q.-M., and Ibrahim, J. Q., (2000).
 %          Monte Carlo Methods in Bayesian Computation. Springer-Verlag.
-
-% Copyright (C) 2001 Aki Vehtari
 %
+% Copyright (C) 2001 Aki Vehtari
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/idis.m b/diag/idis.m
@@ -29,7 +29,7 @@
 %    methods to assess improvement in risk prediction models:
 %    Extension to survival analysis. Statistics in Medicine
 %    30(1):22-38.
-
+%
 % Copyright (C) 2012 Ernesto Ulloa, Aki Vehtari
 
 % This software is distributed under the GNU General Public

diff --git a/diag/ipsrf.m b/diag/ipsrf.m
@@ -29,10 +29,10 @@
 %
 %   See also
 %     CIPSRF, PSRF
-
+%
 % Copyright (C) 1999 Simo S�rkk�
 % Copyright (C) 2004 Aki Vehtari
-%
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/kernel1.m b/diag/kernel1.m
@@ -14,9 +14,9 @@
 %
 %   See also
 %     NDHIST
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/kernelp.m b/diag/kernelp.m
@@ -8,9 +8,8 @@
 %  optimising plug-in partial predictive density. Works well with
 %  reasonable sized X.
 %
-
 % Copyright (C) 2001-2003,2010 Aki Vehtari
-%
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/kernels.m b/diag/kernels.m
@@ -19,9 +19,9 @@
 %
 %   See also
 %     KERNEL1
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/ksstat.m b/diag/ksstat.m
@@ -51,9 +51,9 @@
 %
 %   See also
 %     PSRF, GEYER_IMSE, THIN
-
-% Copyright (C) 2001-2005 Aki Vehtari
 %
+% Copyright (C) 2001-2005 Aki Vehtari
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/mpsrf.m b/diag/mpsrf.m
@@ -30,9 +30,9 @@
 %
 %   See also
 %     CMPSRF, PSRF, CPSRF
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/ndhist.m b/diag/ndhist.m
@@ -28,9 +28,9 @@
 %
 %   See also
 %     KERNEL1, HIST, NDGRID
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/psrf.m b/diag/psrf.m
@@ -34,10 +34,10 @@
 %
 %   See also
 %     CPSRF, MPSRF, IPSRF
-
+%
 % Copyright (C) 1999 Simo Särkkä
 % Copyright (C) 2003-2004,2013 Aki Vehtari
-%
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/diag/rsqr.m b/diag/rsqr.m
@@ -27,7 +27,7 @@
 %    methods to assess improvement in risk prediction models:
 %    Extension to survival analysis. Statistics in Medicine
 %    30(1):22-38.
-
+%
 % Copyright (C) 2012 Tomi Peltola, Ernesto Ulloa, Aki Vehtari
 
 % This software is distributed under the GNU General Public

diff --git a/diag/score.m b/diag/score.m
@@ -9,13 +9,13 @@
 %   its opposite) and X's are the sampled values. n0 is length
 %   of "burn-in" and defaults to 0.
 %
-%   The idea is from:
+%   Reference:
 %     Anne Philippe and Christian P. Robert (Oct, 1998)
 %     Riemann Sums for MCMC Estimation and
 %     Convergence Monitoring. EP CNRS
-
-% Copyright (C) 1999 Simo Särkkä
 %
+% Copyright (C) 1999 Simo Särkkä
+
 % This software is distributed under the GNU General Public 
 % Licence (version 3 or later); please refer to the file 
 % Licence.txt, included with the software, for details.

diff --git a/dist/beta_cdf.m b/dist/beta_cdf.m
@@ -2,7 +2,7 @@
 %  BETA_CDF Beta cumulative distribution function.
 %     P = BETA_CDF(X,A,B) returns the beta cumulative distribution
 %     function with parameters A and B at the values in X.
-
+%
 % Copyright (c) 1995-1997, 2005-2007 Kurt Hornik
 
 % This software is distributed under the GNU General Public

diff --git a/dist/beta_inv.m b/dist/beta_inv.m
@@ -2,7 +2,7 @@
 %  BETA_INV Inverse of the beta cumulative distribution function (cdf).
 %     X = BETA_INV(P,A,B) returns the inverse of the beta cdf with
 %     parameters A and B at the values in P.
-
+%
 % Copyright (c) 1995-1997, 2005-2007 Kurt Hornik
 
 % This software is distributed under the GNU General Public

diff --git a/dist/beta_lpdf.m b/dist/beta_lpdf.m
@@ -8,7 +8,7 @@
 %   functions as a constant matrix of the same size as the other inputs.     
 %
 %   Default value for A and B is 1.
-
+%
 % Copyright (c) 2005 Aki Vehtari
 
 % This software is distributed under the GNU General Public 

diff --git a/dist/beta_pdf.m b/dist/beta_pdf.m
@@ -9,7 +9,7 @@
 %   the other inputs.
 %
 %   Default value for A and B is 1.
-
+%
 % Copyright (c) 2005 Aki Vehtari
 
 % This software is distributed under the GNU General Public 

diff --git a/dist/betarand.m b/dist/betarand.m
@@ -6,7 +6,7 @@
 %     the size of R is the size of the other parameter.
 %
 %     R = BETARAND(A,B,M,N) returns an M-by-N matrix.
-
+%
 % Copyright (c) 1995-1997, 2005-2007 Kurt Hornik
 
 % This software is distributed under the GNU General Public