Added the no-progress flag for project.py status to hide the progress…

[iblanco11981870]

Description

Added the no-progress flag for FlowProject.print_status. This hides the progress bar output generated when FlowProject.print_status, and adds the options to hide the progress bar when desired.

Motivation and Context

The progress bar displays a significant amount of the output for small workspaces and does not give any benefit. Additionally, using FlowProject.print_status in Jupyter notebooks requires special configurations or else it does not work. This addresses issue #602

Checklist:

• I am familiar with the Contributing Guidelines.
• I agree with the terms of the Contributor Agreement.
• My name is on the list of contributors.
• The changes introduced by this pull request are covered by existing or newly introduced tests.
• The package documentation and framework documentation in signac-docs are up to date with these changes.
• I have updated the changelog and added any related issue and pull request numbers for future reference.

[codecov]

Codecov Report

Merging #685 (2918c18) into main (5093591) will increase coverage by 0.17%.
The diff coverage is 100.00%.

@@            Coverage Diff             @@
##             main     #685      +/-   ##
==========================================
+ Coverage   69.10%   69.28%   +0.17%     
==========================================
  Files          43       43              
  Lines        4279     4294      +15     
  Branches     1044     1047       +3     
==========================================
+ Hits         2957     2975      +18     
+ Misses       1109     1108       -1     
+ Partials      213      211       -2     

Files Changed	Coverage Δ
flow/project.py	83.12% <100.00%> (+0.01%)	⬆️
flow/util/misc.py	78.52% <100.00%> (+4.03%)	⬆️

[bdice]

Thanks for working on this @iblanco11981870! I had to rebase this PR because it contained some merged commits that were included by accident and made the PR diff appear incorrectly. Please run these commands to fix your local branch:

$ git fetch --all
$ git checkout feature/print_status
$ git reset --hard origin/feature/print_status

I have some design input as well. See comments. Thank you!

[joaander]

What more needs to be done to complete this pull request? I would like to use it to clean up the output in the HOOMD-blue tutorials.

[klywang]

@joaander I think we're just waiting on a reviewer. I addressed all the suggested changes.

[joaander]

OK, the reviewers may not know unless you click the "re-request review" button or otherwise communicate that to them.

[bdice]

@iblanco11981870 Can you please resolve conflicts on this branch before I review? Thanks!

[bdice]

There is no default value set here.

[b-butler]

Has been reverted.

[bdice]

Trying to make sure I understand here -- why is this store_false and the other line above is store_true? Does the progress behavior match the behavior prior to this PR?

[b-butler]

This did change behavior and has been removed.

[bdice]

@iblanco11981870 Can we push this through or close it?

[bdice]

@b-butler Thanks for requesting my review on this. I took one brief pass but can't dedicate more time to this PR. Please merge when you think it is sufficiently ready.

[joaander]

Thanks!