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Update GEOS-Chem to 12.9.0 preliminary version
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GEOS-Chem 12.9.0 has performance issues that will be resolved in the
coming days. It is not yet benchmark approved.

Signed-off-by: Lizzie Lundgren <[email protected]>
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lizziel committed Jun 26, 2020
1 parent db30b81 commit aec16b5
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2 changes: 1 addition & 1 deletion src/GCHP_GridComp/GEOSChem_GridComp/geos-chem
Submodule geos-chem updated 82 files
+64 −37 GeosCore/aerosol_mod.F90
+0 −2 GeosCore/emissions_mod.F90
+12 −3 GeosCore/fast_jx_mod.F90
+2 −0 GeosCore/flexchem_mod.F90
+27 −12 GeosCore/flexgrid_read_mod.F90
+587 −1 GeosCore/gamap_mod.F90
+37 −8 GeosCore/gosat_ch4_mod.F90
+27 −0 GeosCore/hco_interface_gc_mod.F90
+20 −0 GeosCore/input_mod.F90
+424 −69 GeosCore/isorropiaII_mod.F90
+1 −1 GeosCore/ocean_mercury_mod.F90
+81 −88 GeosCore/planeflight_mod.F90
+60 −0 GeosCore/pops_mod.F90
+77 −3 GeosCore/seasalt_mod.F90
+1,437 −246 GeosCore/sulfate_mod.F90
+0 −1 GeosCore/wetscav_mod.F90
+1 −1 Headers/CMN_FJX_MOD.F90
+8 −0 Headers/input_opt_mod.F90
+78 −21 Headers/species_database.yml
+14 −85 Headers/species_database_mod.F90
+1,184 −56 Headers/state_chm_mod.F90
+1 −0 ISORROPIA/isorropiaII_main_mod.F
+31 −86 Interfaces/GCHP/Chem_GridCompMod.F90
+57 −30 KPP/Custom/Custom.eqn
+1 −1 KPP/Custom/gckpp.kpp
+54 −24 KPP/SOA_SVPOA/SOA_SVPOA.eqn
+1 −1 KPP/SOA_SVPOA/gckpp.kpp
+89 −88 KPP/SOA_SVPOA/gckpp.map
+1,128 −1,097 KPP/SOA_SVPOA/gckpp_Function.F90
+4 −4 KPP/SOA_SVPOA/gckpp_Global.F90
+2 −2 KPP/SOA_SVPOA/gckpp_Initialize.F90
+11,098 −10,586 KPP/SOA_SVPOA/gckpp_Jacobian.F90
+667 −631 KPP/SOA_SVPOA/gckpp_JacobianSP.F90
+1,650 −1,572 KPP/SOA_SVPOA/gckpp_LinearAlgebra.F90
+443 −415 KPP/SOA_SVPOA/gckpp_Monitor.F90
+242 −238 KPP/SOA_SVPOA/gckpp_Parameters.F90
+368 −343 KPP/SOA_SVPOA/gckpp_Rates.F90
+506 −498 KPP/SOA_SVPOA/gckpp_Util.F90
+50 −20 KPP/Standard/Standard.eqn
+2 −1 KPP/Standard/gckpp.kpp
+95 −94 KPP/Standard/gckpp.map
+1,242 −1,209 KPP/Standard/gckpp_Function.F90
+4 −4 KPP/Standard/gckpp_Global.F90
+3,018 −1,642 KPP/Standard/gckpp_HetRates.F90
+2 −2 KPP/Standard/gckpp_Initialize.F90
+1 −3 KPP/Standard/gckpp_Integrator.F90
+12,064 −11,486 KPP/Standard/gckpp_Jacobian.F90
+726 −688 KPP/Standard/gckpp_JacobianSP.F90
+1,809 −1,724 KPP/Standard/gckpp_LinearAlgebra.F90
+460 −433 KPP/Standard/gckpp_Monitor.F90
+253 −249 KPP/Standard/gckpp_Parameters.F90
+406 −381 KPP/Standard/gckpp_Rates.F90
+532 −523 KPP/Standard/gckpp_Util.F90
+100 −69 KPP/Tropchem/Tropchem.eqn
+1 −2 KPP/Tropchem/gckpp.kpp
+88 −86 KPP/Tropchem/gckpp.map
+1,123 −1,091 KPP/Tropchem/gckpp_Function.F90
+4 −4 KPP/Tropchem/gckpp_Global.F90
+2 −2 KPP/Tropchem/gckpp_Initialize.F90
+11,044 −10,524 KPP/Tropchem/gckpp_Jacobian.F90
+663 −625 KPP/Tropchem/gckpp_JacobianSP.F90
+1,641 −1,557 KPP/Tropchem/gckpp_LinearAlgebra.F90
+471 −443 KPP/Tropchem/gckpp_Monitor.F90
+236 −232 KPP/Tropchem/gckpp_Parameters.F90
+368 −343 KPP/Tropchem/gckpp_Rates.F90
+492 −484 KPP/Tropchem/gckpp_Util.F90
+ KPP/Tropchem/kpp
+1 −1 ObsPack/obspack_mod.F90
+0 −7 run/GCHPctm/ExtData.rc.templates/ExtData.rc.TransportTracers
+69 −79 run/GCHPctm/HEMCO_Config.rc.templates/HEMCO_Config.rc.TransportTracers
+110 −92 run/GCHPctm/HEMCO_Config.rc.templates/HEMCO_Config.rc.benchmark
+110 −92 run/GCHPctm/HEMCO_Config.rc.templates/HEMCO_Config.rc.standard
+23 −10 run/GCHPctm/HEMCO_Diagn.rc.templates/HEMCO_Diagn.rc.benchmark
+20 −13 run/GCHPctm/HEMCO_Diagn.rc.templates/HEMCO_Diagn.rc.standard
+3,096 −25 run/GCHPctm/HISTORY.rc.templates/HISTORY.rc.benchmark
+43 −8 run/GCHPctm/HISTORY.rc.templates/HISTORY.rc.standard
+8 −0 run/GCHPctm/createRunDir.sh
+1 −0 run/GCHPctm/input.geos.templates/input.geos.TransportTracers
+5 −0 run/GCHPctm/input.geos.templates/input.geos.benchmark
+5 −0 run/GCHPctm/input.geos.templates/input.geos.standard
+89 −62 run/GEOS/HEMCO_Config.rc
+5 −0 run/GEOS/input.geos.rc

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