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lint_format2 / lint_ga signature change broke Planemo integration

Status: Open.

#187 In galaxyproject/gxformat2;

· jmchilton opened on Apr 15, 2026

Format2 schema accepts documents missing required class: GalaxyWorkflow field

Status: Open.

#186 In galaxyproject/gxformat2;

· jmchilton opened on Apr 14, 2026

real-multi-data-input.ga has step-level 'optional' field not in native schema

Status: Open.

#172 In galaxyproject/gxformat2;

· jmchilton opened on Mar 31, 2026

Deduplicate generated schema artifacts using pydantic:module annotation

Status: Open.

#167 In galaxyproject/gxformat2;

· jmchilton opened on Mar 26, 2026

Lint with expanded workflows to validate URL/import subworkflows

Status: Open.

#162 In galaxyproject/gxformat2;

· jmchilton opened on Mar 25, 2026

Native schema: steps, input_connections, post_job_actions, and creator cannot be fully typed

Status: Open.

#151 In galaxyproject/gxformat2;

· jmchilton opened on Mar 21, 2026

having gxformat2 as a tool in Galaxy

Status: Open.

#91 In galaxyproject/gxformat2;

· microfuge opened on Sep 10, 2023

tool_id can be null, passes linter, but crashes Cytoscape

Status: Open.

#87 In galaxyproject/gxformat2;

· denis-yuen opened on Jan 6, 2023

Single output not referencing full output on export

Status: Open.

#80 In galaxyproject/gxformat2;

· mvdbeek opened on Feb 21, 2022

Generate inheritance diagram

Status: Open.

#78 In galaxyproject/gxformat2;

· mr-c opened on Dec 17, 2021

Enable codecov.io or similar?

Status: Open.

#77 In galaxyproject/gxformat2;

· mr-c opened on Dec 13, 2021

Add version field to Format 2

Status: Open.

#66 In galaxyproject/gxformat2;

· nsoranzo opened on Jul 13, 2021