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Add kraken2 datatype [DRAFT]#22455

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pvanheus wants to merge 2 commits intogalaxyproject:devfrom
pvanheus:add_kraken2_datatype
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Add kraken2 datatype [DRAFT]#22455
pvanheus wants to merge 2 commits intogalaxyproject:devfrom
pvanheus:add_kraken2_datatype

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The update in galaxyproject/tools-iuc#7257 for the kraken2 tool allows it to use a custom database passed as a parameter. Currently this uses the Directory datatype. This datatype allows a more specific input type to be specified and also allows a compressed archive to be uploaded and unpacked to the kraken2 database datatype.

How to test the changes?

(Select all options that apply)

  • I've included appropriate automated tests.
  • This is a refactoring of components with existing test coverage.
  • Instructions for manual testing are as follows:
    1. [add testing steps and prerequisites here if you didn't write automated tests covering all your changes]

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  • I agree to license these and all my past contributions to the core galaxy codebase under the MIT license.

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