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tcezard
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May 17, 2023
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I will merge this to dev to make it easier to see and review this. |
tcezard
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Aug 23, 2023
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| The GA4GH digest algorithm, `sha512t24u`, was created as part of the [Variation Representation Specification standard](https://vrs.ga4gh.org/en/stable/impl-guide/computed_identifiers.html). This procedure is described as ([Hart _et al_. 2020](https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0239883)): | ||
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| - performing a SHA-512 digest on a binary blob of data | ||
| - truncate the resulting digest to 24 bytes | ||
| - encodes the 24 bytes using `base64url` ([RFC 4648](https://datatracker.ietf.org/doc/html/rfc4648#section-5)) resulting in a 32 character string | ||
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| This converts the value of each attribute in the seqcol into a digest string. Applying this to each value will produce a structure that looks like this: |
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I think this should get its own section so it can be refered to elsewhere like in the sorted_name_length_pairs section
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agreed. would it make sense in a footnote, maybe?
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Far from final, but this at least brings a draft specification up-to-date with our current decisions. Take a look if you can but the goal here is to provide a general, one-stop description of seqcol that could be useful to have during Connect.
I do still need to get the 'inherent' stuff in there, though.
TODO: